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Protein
Submitted name:

Polycomb group protein

Gene

SDG1501

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Polycomb group proteinImported
Gene namesi
Name:SDG1501Imported
ORF Names:PHYPADRAFT_187038Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727 Componenti: Partially assembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliA9SP73.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 SET domain.UniRule annotation

Phylogenomic databases

InParanoidiA9SP73.
KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9SP73-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSSYAIKE EDHEDYEEEE DDEDAAGETV AIALQGFMEQ VQCERQAYVK
60 70 80 90 100
RRMNSNKERL KGYTWNLLKL DQERKSVWER REVSSFSSLC QKKHQAYGNL
110 120 130 140 150
NGSDSSGEKD GRLATQESGG LDKPISIIFG CQTGGKTAIR PVKLRKVENV
160 170 180 190 200
PPYTTWIYLD RNQRMTEDQS VVGRRRIYYD SDGNETLIAS DSEEEDPGDD
210 220 230 240 250
DDKDEPKHDF SKGEDTLIWM SIQELGLKSV VLNELSDVLD IKPEEIEARY
260 270 280 290 300
DILLKDFAKN AVKEENELPD TQEDDDNETK DLLAAMDSFD TLFCRRCLVF
310 320 330 340 350
DCRLHGCSQA IVHPSERQQP WSGTEEDPSP CSKDCYLLVR DVDAGLRDVS
360 370 380 390 400
QSPEQGQTAT NGQEDDVGVS ERFSKRSGMS SRERSSSSET QAWAAPTILD
410 420 430 440 450
PGATQPVGRT GSWSKVGSKE KKSEKRPSAT RRSLRVKKAR QGVLPSKRKK
460 470 480 490 500
DVEKDGEVEK DDDMEKDDDV DKDEDRDKDD DMDKDDLEKD DDLEKDDDTS
510 520 530 540 550
REGEADEKIA VASAPEGFAF KEGQDEAPGQ AVKVEVGVGW TEMEKGLYEK
560 570 580 590 600
GLQIFGRNSC LVSRNLLQGC KTCAEVAKYA MELDAAGLGG VRRIADSLAA
610 620 630 640 650
SRARLYGVRR KKNMRKLKYT FKSVVHPLIR KRLANGKDQT CRQYTPCNCL
660 670 680 690 700
YTCGKQCPCL LNGTCCEKYC GCSKSCKNRF RGCHCAKSNC CSRQCPCFAA
710 720 730 740 750
GRECDPDVCR NCWVGCGEKH VKPAVEYTCH NMKLMLKQQQ RVLLGRSDVA
760 770 780 790 800
GWGAFLKKTV AKHEYLGEYT GELISHREAD KRGKIYDREN SSFLFNLNDQ
810 820 830 840 850
ASLYVLDACR KGDKLKFANH SPTPNCYAKV IMVSGDHRVG IFAKERIGAG
860 870 880 890
EELFYDYQYE PDRAPVWARK PDDPNNKRDD MPSTGGRAQK VA
Length:892
Mass (Da):100,430
Last modified:February 5, 2008 - v1
Checksum:i6B79EF083AE101E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544989 Genomic DNA. Translation: EDQ67061.1.
RefSeqiXP_001768188.1. XM_001768136.1.
UniGeneiPpa.1646.

Genome annotation databases

GeneIDi5931312.
KEGGippp:PHYPADRAFT_187038.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544989 Genomic DNA. Translation: EDQ67061.1.
RefSeqiXP_001768188.1. XM_001768136.1.
UniGeneiPpa.1646.

3D structure databases

ProteinModelPortaliA9SP73.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5931312.
KEGGippp:PHYPADRAFT_187038.

Phylogenomic databases

InParanoidiA9SP73.
KOiK11430.

Family and domain databases

InterProiIPR026489. CXC_dom.
IPR025778. Hist-Lys_N-MeTrfase_EZ.
IPR001214. SET_dom.
[Graphical view]
PfamiPF00856. SET. 1 hit.
[Graphical view]
SMARTiSM00317. SET. 1 hit.
[Graphical view]
PROSITEiPS51633. CXC. 1 hit.
PS51576. SAM_MT43_EZ. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.

Entry informationi

Entry nameiA9SP73_PHYPA
AccessioniPrimary (citable) accession number: A9SP73
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 27, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.