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A9SNI6 (A9SNI6_PHYPA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:PHYPADRAFT_132686 EMBL EDQ67200.1
OrganismPhyscomitrella patens subsp. patens (Moss) [Reference proteome]
Taxonomic identifier3218 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella

Protein attributes

Sequence length383 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequences

Sequence LengthMass (Da)Tools
A9SNI6 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 25A89804FB7ECDB0

FASTA38341,382
        10         20         30         40         50         60 
MVNLSAPSGV VVQPPQLKHQ DWRSCSANAV RLVANAGSRQ WCSSPSSSGR RVFGVRCEGG 

        70         80         90        100        110        120 
QRVGFLGRLG RVIKEKAKSD IQLLFSGFSK TRENLAVVDE LLTYWNLDES ESILDELEEV 

       130        140        150        160        170        180 
LLVSDFGPKT ALKIVDTIRK DILAGRLKSG PQIKEALKKN IFKLLTERVT TTELQLGNSR 

       190        200        210        220        230        240 
PAVLMIVGVN GGGKTTTLGK LANRFKKEGV KVLMAAGDTF RAAAGEQLEV WAQRTGSEIV 

       250        260        270        280        290        300 
MAEGPKPRPA AVLSQAVRRA VEEDFDVVLC DTSGRLHTNY NLMEELRGCK RAVSKALSSA 

       310        320        330        340        350        360 
PNEVLLVLDG TTGLNMLAQA REFNQVIGVT GFILTKLDGT ARGGCVVSVV DELSIPVKFV 

       370        380 
GVGEGIDDLQ PFDAQSFVDA LFP 

« Hide

References

« Hide 'large scale' references
[1]"The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y. expand/collapse author list , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Gransden 2004.
[2]"Evolution from the prokaryotic to the higher plant chloroplast signal recognition particle: the signal recognition particle RNA is conserved in plastids of a wide range of photosynthetic organisms."
Trager C., Rosenblad M.A., Ziehe D., Garcia-Petit C., Schrader L., Kock K., Richter C.V., Klinkert B., Narberhaus F., Herrmann C., Hofmann E., Aronsson H., Schunemann D.
Plant Cell 24:4819-4836(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 80-383.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS544987 Genomic DNA. Translation: EDQ67200.1.
RefSeqXP_001767925.1. XM_001767873.1.
UniGenePpa.1028.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4AK9X-ray1.80A/B80-383[»]
ProteinModelPortalA9SNI6.
SMRA9SNI6. Positions 79-382.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3218.JGI132686.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5931207.
KEGGppp:PHYPADRAFT_132686.

Phylogenomic databases

KOK03110.
ProtClustDBCLSN2688951.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00920. FtsY.
InterProIPR003593. AAA+_ATPase.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR027417. P-loop_NTPase.
IPR013822. Signal_recog_particl_SRP54_hlx.
IPR004390. SR_rcpt_FtsY.
IPR000897. SRP54_GTPase_dom.
[Graphical view]
PfamPF00448. SRP54. 1 hit.
PF02881. SRP54_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
SM00278. HhH1. 1 hit.
SM00962. SRP54. 1 hit.
SM00963. SRP54_N. 1 hit.
[Graphical view]
SUPFAMSSF47364. SSF47364. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00064. ftsY. 1 hit.
PROSITEPS00300. SRP54. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9SNI6_PHYPA
AccessionPrimary (citable) accession number: A9SNI6
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 16, 2014
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)