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A9SNI6

- A9SNI6_PHYPA

UniProt

A9SNI6 - A9SNI6_PHYPA

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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_132686

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. GTP binding Source: EnsemblPlants/Gramene

GO - Biological processi

  1. DNA repair Source: InterPro
  2. GTP catabolic process Source: EnsemblPlants/Gramene
  3. SRP-dependent cotranslational protein targeting to membrane Source: EnsemblPlants/Gramene
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_132686Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI132686.

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4AK9X-ray1.80A/B80-383[»]
ProteinModelPortaliA9SNI6.
SMRiA9SNI6. Positions 79-382.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiA9SNI6.
KOiK03110.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00920. FtsY.
InterProiIPR003593. AAA+_ATPase.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR027417. P-loop_NTPase.
IPR013822. Signal_recog_particl_SRP54_hlx.
IPR004390. SR_rcpt_FtsY.
IPR000897. SRP54_GTPase_dom.
[Graphical view]
PfamiPF00448. SRP54. 1 hit.
PF02881. SRP54_N. 1 hit.
[Graphical view]
SMARTiSM00382. AAA. 1 hit.
SM00278. HhH1. 1 hit.
SM00962. SRP54. 1 hit.
SM00963. SRP54_N. 1 hit.
[Graphical view]
SUPFAMiSSF47364. SSF47364. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00064. ftsY. 1 hit.
PROSITEiPS00300. SRP54. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9SNI6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVNLSAPSGV VVQPPQLKHQ DWRSCSANAV RLVANAGSRQ WCSSPSSSGR
60 70 80 90 100
RVFGVRCEGG QRVGFLGRLG RVIKEKAKSD IQLLFSGFSK TRENLAVVDE
110 120 130 140 150
LLTYWNLDES ESILDELEEV LLVSDFGPKT ALKIVDTIRK DILAGRLKSG
160 170 180 190 200
PQIKEALKKN IFKLLTERVT TTELQLGNSR PAVLMIVGVN GGGKTTTLGK
210 220 230 240 250
LANRFKKEGV KVLMAAGDTF RAAAGEQLEV WAQRTGSEIV MAEGPKPRPA
260 270 280 290 300
AVLSQAVRRA VEEDFDVVLC DTSGRLHTNY NLMEELRGCK RAVSKALSSA
310 320 330 340 350
PNEVLLVLDG TTGLNMLAQA REFNQVIGVT GFILTKLDGT ARGGCVVSVV
360 370 380
DELSIPVKFV GVGEGIDDLQ PFDAQSFVDA LFP
Length:383
Mass (Da):41,382
Last modified:February 5, 2008 - v1
Checksum:i25A89804FB7ECDB0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544987 Genomic DNA. Translation: EDQ67200.1.
RefSeqiXP_001767925.1. XM_001767873.1.
UniGeneiPpa.1028.

Genome annotation databases

GeneIDi5931207.
KEGGippp:PHYPADRAFT_132686.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544987 Genomic DNA. Translation: EDQ67200.1 .
RefSeqi XP_001767925.1. XM_001767873.1.
UniGenei Ppa.1028.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4AK9 X-ray 1.80 A/B 80-383 [» ]
ProteinModelPortali A9SNI6.
SMRi A9SNI6. Positions 79-382.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI132686.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5931207.
KEGGi ppp:PHYPADRAFT_132686.

Phylogenomic databases

InParanoidi A9SNI6.
KOi K03110.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00920. FtsY.
InterProi IPR003593. AAA+_ATPase.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR027417. P-loop_NTPase.
IPR013822. Signal_recog_particl_SRP54_hlx.
IPR004390. SR_rcpt_FtsY.
IPR000897. SRP54_GTPase_dom.
[Graphical view ]
Pfami PF00448. SRP54. 1 hit.
PF02881. SRP54_N. 1 hit.
[Graphical view ]
SMARTi SM00382. AAA. 1 hit.
SM00278. HhH1. 1 hit.
SM00962. SRP54. 1 hit.
SM00963. SRP54_N. 1 hit.
[Graphical view ]
SUPFAMi SSF47364. SSF47364. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00064. ftsY. 1 hit.
PROSITEi PS00300. SRP54. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.
  2. "Evolution from the prokaryotic to the higher plant chloroplast signal recognition particle: the signal recognition particle RNA is conserved in plastids of a wide range of photosynthetic organisms."
    Trager C., Rosenblad M.A., Ziehe D., Garcia-Petit C., Schrader L., Kock K., Richter C.V., Klinkert B., Narberhaus F., Herrmann C., Hofmann E., Aronsson H., Schunemann D.
    Plant Cell 24:4819-4836(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) OF 80-383.

Entry informationi

Entry nameiA9SNI6_PHYPA
AccessioniPrimary (citable) accession number: A9SNI6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 29, 2014
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome, Reference proteomeImported

External Data

Dasty 3