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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_212784

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_212784Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S83_144V6.1.

Structurei

3D structure databases

ProteinModelPortaliA9SIV3.
SMRiA9SIV3. Positions 28-969.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiA9SIV3.
KOiK01595.
OMAiWYMNRIN.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9SIV3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMLQKMASID AQMRLLVPKR VSDDDKLIEY DALLLDRFLD ILEELHGKEL
60 70 80 90 100
KDTVQDLYEL SGLYSKTDGH GDVEKLRQLA EMLNNLDPGV NIVVASSFSH
110 120 130 140 150
MLNLGNLAEE VQIALRRRVS NAKKGDIGDE NSALTESDME ETLHRLVKQL
160 170 180 190 200
KKSPEEIFEA LKDQTVDLVL TAHPTQAVRR SLLQKHSRIR NCLSQMYQKD
210 220 230 240 250
ITADEKKELD EALQREIQAA FRTDEIRRSQ PTPQDEMRAG MSYFHETIWN
260 270 280 290 300
GLPKFLRRVD TALKSIGVKE RLPYNVKLIQ FSSWMGGDRD GNPRVTPEVT
310 320 330 340 350
RDVCLLARLM AANLYFSQIE ELMFELSMWR CSDELKARVL KIESLQRKEA
360 370 380 390 400
KHYIEFWKHI PPSEPFRVLL GDMRDKLYNT RERMRLLLQN GKSDIPIEDT
410 420 430 440 450
YTDASQILEP LELCYRSLCE TGDKPIADGS LLDFMRQVSC FGLSLVKLDI
460 470 480 490 500
RQESDRHTDV IDAITNHLGI GSYRNWTEEQ RQEWLLSELR GKRPLFGADL
510 520 530 540 550
PTTEEIKDVL DTMKVVAELP QDCFGAYVIS MATAPSDVLA VELLQRECRI
560 570 580 590 600
KKPLRVVPLF EKLADLEAAP AALSRLFSID WYLNRINGKQ EVMIGYSDSG
610 620 630 640 650
KDAGRLSAAW QMFKAQEDLV KVAKQYGVRL TMFHGRGGTV GRGGGPTHLA
660 670 680 690 700
ILSQPPDTIN GSLRVTIQGE VIEQSFGEEH LCFRTLQRFT AATLEHGMHP
710 720 730 740 750
PIAPKPEWRE LMDAMAVAST KEYRSIVFQN PSFVEYFRAA TPELEYGRMN
760 770 780 790 800
IGSRPSKRKP SGGIESLRAI PWIFAWTQTR FHLPVWLGLG SALKQALQSD
810 820 830 840 850
PRNIATFRRM YNQWPFFRVT IDLVEMVFAK GDPRIAALYD DLLVSDELKP
860 870 880 890 900
LGEELRQKYN ETRDLLLKIT FHDEILQGNP SLKQRLRLRE PYITALNVQQ
910 920 930 940 950
ALVLKKMRDQ GLQFCALQNS SKDQSDIPTT PKRAAELVEL NPTTEFPPGL
960
EDTLILTMKG IAAGIQNTG
Length:969
Mass (Da):110,477
Last modified:February 5, 2008 - v1
Checksum:iD31FF09578BAA395
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544972 Genomic DNA. Translation: EDQ68871.1.
RefSeqiXP_001766239.1. XM_001766187.1.
UniGeneiPpa.398.

Genome annotation databases

GeneIDi5929438.
KEGGippp:PHYPADRAFT_212784.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544972 Genomic DNA. Translation: EDQ68871.1.
RefSeqiXP_001766239.1. XM_001766187.1.
UniGeneiPpa.398.

3D structure databases

ProteinModelPortaliA9SIV3.
SMRiA9SIV3. Positions 28-969.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3218.PP1S83_144V6.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5929438.
KEGGippp:PHYPADRAFT_212784.

Phylogenomic databases

InParanoidiA9SIV3.
KOiK01595.
OMAiWYMNRIN.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.

Entry informationi

Entry nameiA9SIV3_PHYPA
AccessioniPrimary (citable) accession number: A9SIV3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: June 24, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.