A9SFE2 (A9SFE2_PHYPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EDQ70137.1

Gene names

ORF Names:

PHYPADRAFT_129004 EMBL EDQ70137.1

Organism

Physcomitrella patens subsp. patens (Moss) [Reference proteome]

Taxonomic identifier

145481 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Bryophyta › Bryophytina › Bryopsida › Funariidae › Funariales › Funariaceae › Physcomitrella › Physcomitrella patens

Protein attributes

Sequence length	428 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003532 WD repeat RuleBase RU000362
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EDQ70137.1

Sequences

	Sequence		Length	Mass (Da)
	A9SFE2 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 576A6C6B22BD2861	FASTA	428	47,070
	10 20 30 40 50 60 DRFITDRSAM DFNVANLMLT KENSSMDVIS PSRDEYKKQL AESLLNNNGQ KQSRILAFKS 70 80 90 100 110 120 KPPPPPEGLL NNNRTLYSQN VGAAQFKPKK MFRHIPQAPE RTLDAPDMVD DYYLNLMDWS 130 140 150 160 170 180 SSNVLAIALG MTVYLWDATT SSIEELVTVD EEGPITSVSW APDGQYLAVG LNNSTVQLWD 190 200 210 220 230 240 STSLRQLRTL RGHSARVGAL AWNGPTLATG GRDNAILNHD VRIRDHVIGS MEAHEQEVCG 250 260 270 280 290 300 LKWSPSGQQL ASGGNDNILH IWDASAASSA SASPLHSLDE HQAAVKALAW CPFQSNLLAS 310 320 330 340 350 360 GGGTADRCIK FWNTHTGACV NSIDTHSQVC ALQWSKHEKE ILSSHGFSQN QLCLWKYPSM 370 380 390 400 410 420 VKMTELSGHT SRVLHLAQSP DGYTVASAAG DETLRFWNVF GTPETKEVNI SHRTKKVGSA LTSLTRIR

References

[1]

"The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants." Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y. , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L. Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Gransden 2004.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS544962 Genomic DNA. Translation: EDQ70137.1.
RefSeq	XP_001765142.1. XM_001765090.1.
3D structure databases
ProteinModelPortal	A9SFE2.
ModBase	Search...
Protein-protein interaction databases
STRING	3218.JGI129004.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5928279.
KEGG	ppp:PHYPADRAFT_129004.
Phylogenomic databases
KO	K03363.
ProtClustDB	CLSN2704611.
Family and domain databases
Gene3D	2.130.10.10. 1 hit.
InterPro	IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR019775. WD40_repeat_CS. IPR017986. WD40_repeat_dom. [Graphical view]
Pfam	PF00400. WD40. 5 hits. [Graphical view]
SMART	SM00320. WD40. 7 hits. [Graphical view]
SUPFAM	SSF50978. WD40_like. 1 hit.
PROSITE	PS00678. WD_REPEATS_1. 3 hits. PS50082. WD_REPEATS_2. 3 hits. PS50294. WD_REPEATS_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9SFE2_PHYPA

Accession

Primary (citable) accession number: A9SFE2

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)