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Protein

Translation machinery-associated protein 22

Gene

PHYPA_016252

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Translation machinery-associated protein 22UniRule annotation
Gene namesi
ORF Names:PHYPA_016252Imported, PHYPADRAFT_211491Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Chromosome 12

Subcellular locationi

Keywords - Cellular componenti

CytoplasmUniRule annotation

PTM / Processingi

Proteomic databases

PRIDEiA9SEK1

Interactioni

Subunit structurei

Interacts with the 40S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi3218.PP1S70_238V6.1

Structurei

3D structure databases

ProteinModelPortaliA9SEK1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini102 – 173SUI1InterPro annotationAdd BLAST72

Domaini

The SUI1 domain may be involved in RNA binding.UniRule annotation

Sequence similaritiesi

Belongs to the DENR family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3239 Eukaryota
COG0023 LUCA
InParanoidiA9SEK1
OMAiEKWPQID

Family and domain databases

InterProiView protein in InterPro
IPR005873 Drp1
IPR001950 SUI1
IPR005872 SUI1_arc_bac
IPR036877 SUI1_dom_sf
PANTHERiPTHR12789 PTHR12789, 1 hit
PfamiView protein in Pfam
PF01253 SUI1, 1 hit
SUPFAMiSSF55159 SSF55159, 2 hits
TIGRFAMsiTIGR01159 DRP1, 1 hit
PROSITEiView protein in PROSITE
PS50296 SUI1, 1 hit

Sequencei

Sequence statusi: Complete.

A9SEK1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVKLQPVQV LYCPVCSMPA EYCEFSPDFE KCKPWLIKNV PDLYPQLVKE
60 70 80 90 100
AAEKTAEQLD GLTVGGENAG AKGEGSSSEP KKEDEVKRLP GGKVKKKEKP
110 120 130 140 150
EVVVEKIVRN KRKCVTIIKG LDMFGIKLSE ASKKLGKKFA SGASVVKGPT
160 170 180 190
EKEQIDVQGD IMYDIVEFIT DTWKNVPESA IYFIEDGKKV SASG
Length:194
Mass (Da):21,329
Last modified:February 5, 2008 - v1
Checksum:iA86A9838151EEB7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544959 Genomic DNA Translation: EDQ70499.1
ABEU02000012 Genomic DNA Translation: PNR43869.1
RefSeqiXP_001764800.1, XM_001764748.1
UniGeneiPpa.18231

Genome annotation databases

EnsemblPlantsiPP1S70_238V6.1; PP1S70_238V6.1; PP1S70_238V6
GeneIDi5927983
GrameneiPP1S70_238V6.1; PP1S70_238V6.1; PP1S70_238V6
KEGGippp:PHYPADRAFT_211491

Similar proteinsi

Entry informationi

Entry nameiA9SEK1_PHYPA
AccessioniPrimary (citable) accession number: A9SEK1
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 25, 2018
This is version 56 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported