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A9SDK9

- A9SDK9_PHYPA

UniProt

A9SDK9 - A9SDK9_PHYPA

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Protein
Submitted name:

Predicted protein

Gene
PHYPADRAFT_127975
Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_127975Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI127975.

Structurei

3D structure databases

ProteinModelPortaliA9SDK9.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A9SDK9-1 [UniParc]FASTAAdd to Basket

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MKETRGHNTI DSMFASRYVQ CELPKFTIPE RATPKDAAYQ IISDELMLDG    50
NPRLNLASFV TTWMEPECDK LIMSALNKNY IDMDEYPITT ELQDRCVNMV 100
ARLFNAPIEE GEQAIGAGTV GSSEAIMLAG LAFKRKWQNE RKAAGKPWDK 150
PNLVTGANVQ VCWEKFARYF EVELREVKLK EDYYVMDPYK AVELVDENTI 200
CVCAILGSTY NGEFEDVQLL NDLLEEKNRE KGLHVPIHVD AASGGFIAPF 250
LYPDIVWDFR LPLVKSINVS GHKYGLVYAG IGWVVWRSKE DLPEELVFHV 300
NYLGADQPTF TLNFSKGASQ VIAQYYQLIR LGFEGYKNIM ANCAMNAKIL 350
TKAIESTGRF KILSKEVGVP VVAFSLLDNS DHNEYEISHQ LRHYGWTVPA 400
YTMAADAQHV TLLRVVVRED FSRSLSDRLL TDIKRVLAYF DARPSKLIEA 450
VTAAVVEENK EQHLEMPTTP DAVKATQAFN TVILEHVACK KKHNGHHHSR 500
SRGGHGKKHA SPKANGVC 518
Length:518
Mass (Da):58,395
Last modified:February 5, 2008 - v1
Checksum:i2C3D4FC5C6E5A446
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544957 Genomic DNA. Translation: EDQ70761.1.
RefSeqiXP_001764494.1. XM_001764442.1.
UniGeneiPpa.5625.

Genome annotation databases

GeneIDi5927597.
KEGGippp:PHYPADRAFT_127975.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544957 Genomic DNA. Translation: EDQ70761.1 .
RefSeqi XP_001764494.1. XM_001764442.1.
UniGenei Ppa.5625.

3D structure databases

ProteinModelPortali A9SDK9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI127975.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5927597.
KEGGi ppp:PHYPADRAFT_127975.

Phylogenomic databases

KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004.

Entry informationi

Entry nameiA9SDK9_PHYPA
AccessioniPrimary (citable) accession number: A9SDK9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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