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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_189591

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_189591Imported, PHYPADRAFT_196406Imported, PHYPADRAFT_197211Imported, PHYPADRAFT_199474Imported, PHYPADRAFT_210405Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Partially assembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S61_268V6.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uS12 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1749. Eukaryota.
COG0048. LUCA.
KOiK02973.
OMAiKFRWSQR.

Family and domain databases

CDDicd03367. Ribosomal_S23. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR006032. Ribosomal_S12/S23.
IPR005680. Ribosomal_S23_euk/arc.
PANTHERiPTHR11652. PTHR11652. 1 hit.
PfamiView protein in Pfam
PF00164. Ribosom_S12_S23. 1 hit.
PIRSFiPIRSF002133. Ribosomal_S12/S23. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00982. uS12_E_A. 1 hit.
PROSITEiView protein in PROSITE
PS00055. RIBOSOMAL_S12. 1 hit.

Sequencei

Sequence statusi: Complete.

A9SB19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKTRGMGAG RKLKNHRRAQ LWADKSYKKS HLGNEWKKPF AGSSHAKGIV
60 70 80 90 100
LEKIGIEAKQ PNSAIRKCAR VQLIKNGKKI AAFVPNDGCL NYIEENDEVL
110 120 130 140
IAGFGRKGHA VGDIPGVRFK VVKVSGVSLL ALFKEKKEKP RS
Length:142
Mass (Da):15,633
Last modified:February 5, 2008 - v1
Checksum:iDEC679B9BE434FF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS545259 Genomic DNA. Translation: EDQ51524.1.
DS545176 Genomic DNA. Translation: EDQ54356.1.
DS545153 Genomic DNA. Translation: EDQ55456.1.
DS545024 Genomic DNA. Translation: EDQ63961.1.
DS544950 Genomic DNA. Translation: EDQ71664.1.
RefSeqiXP_001763475.1. XM_001763423.1.
XP_001771250.1. XM_001771198.1.
XP_001779772.1. XM_001779720.1.
XP_001780799.1. XM_001780747.1.
XP_001783629.1. XM_001783577.1.
UniGeneiPpa.4161.
Ppa.438.
Ppa.517.
Ppa.6321.
Ppa.7491.

Genome annotation databases

EnsemblPlantsiPP1S135_33V6.1; PP1S135_33V6.1; PP1S135_33V6.
PP1S264_73V6.1; PP1S264_73V6.1; PP1S264_73V6.
PP1S287_20V6.1; PP1S287_20V6.1; PP1S287_20V6.
PP1S372_2V6.1; PP1S372_2V6.1; PP1S372_2V6.
PP1S61_268V6.1; PP1S61_268V6.1; PP1S61_268V6.
GeneIDi5926679.
5934415.
5942959.
5944024.
5946856.
GrameneiPP1S135_33V6.1; PP1S135_33V6.1; PP1S135_33V6.
PP1S264_73V6.1; PP1S264_73V6.1; PP1S264_73V6.
PP1S287_20V6.1; PP1S287_20V6.1; PP1S287_20V6.
PP1S372_2V6.1; PP1S372_2V6.1; PP1S372_2V6.
PP1S61_268V6.1; PP1S61_268V6.1; PP1S61_268V6.
KEGGippp:PHYPADRAFT_189591.
ppp:PHYPADRAFT_196406.
ppp:PHYPADRAFT_197211.
ppp:PHYPADRAFT_199474.
ppp:PHYPADRAFT_210405.

Similar proteinsi

Entry informationi

Entry nameiA9SB19_PHYPA
AccessioniPrimary (citable) accession number: A9SB19
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: June 7, 2017
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported