Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

SWR1 complex protein, SNF2 family DNA-dependent ATPase

Gene

CHR1515

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
SWR1 complex protein, SNF2 family DNA-dependent ATPaseImported
Gene namesi
Name:CHR1515Imported
ORF Names:PHYPADRAFT_125588Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S55_124V6.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini515 – 680Helicase ATP-bindingInterPro annotationAdd BLAST166
Domaini1047 – 1200Helicase C-terminalInterPro annotationAdd BLAST154
Domaini1647 – 1702Myb-likeInterPro annotationAdd BLAST56

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili1403 – 1430Sequence analysisAdd BLAST28

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0391. Eukaryota.
ENOG410XP0A. LUCA.
InParanoidiA9S832.
KOiK11320.

Family and domain databases

InterProiView protein in InterPro
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR009057. Homeobox-like.
IPR017877. Myb-like_dom.
IPR027417. P-loop_NTPase.
IPR000330. SNF2_N.
PfamiView protein in Pfam
PF00271. Helicase_C. 1 hit.
PF00176. SNF2_N. 1 hit.
SMARTiView protein in SMART
SM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF52540. SSF52540. 3 hits.
PROSITEiView protein in PROSITE
PS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS50090. MYB_LIKE. 1 hit.

Sequencei

Sequence statusi: Fragment.

A9S832-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQFLEANKDK KVQPKSKKPA RPKTHWDFVI EEMTWLAKGK PTTKGWIFLQ
60 70 80 90 100
SHEECTKCSK KFLKILLVHQ EEEQRMRRVA SNIAKDVKKF WLKVDKLVSY
110 120 130 140 150
KQQLLVEERK KKALDKHLDF LLGQTERYST MLAENLADNT TAHEPQSHQP
160 170 180 190 200
FPSLCKEVSS TDIQVLSVLS EQINVSGEAE KLEGAVRMEV EGDDEFIVED
210 220 230 240 250
KDEQEDDEAT LEADEALITE EERKEELLAL QIESELPLED LLIAYKLMRD
260 270 280 290 300
QEDDDDKEEK VVEGPTYVTP VEESKKGTSA AAHDIGSLGQ PDSVEGCLVA
310 320 330 340 350
SETDENLAKL VVGVTHRNTI GAFLTQVKPQ KRRHLSPKSL QHQIGELQVC
360 370 380 390 400
TADDDERTLE EEERIAMEEG DRNINEINEL KLESEMPLEE LLAKYRSGIS
410 420 430 440 450
GSSSDDEDDE RGVNYFSEAI ERMGEPSTSG RDYQRLSSTE VDREMNNFNV
460 470 480 490 500
INTVETLDVG ENKKSEDRLA DYAAAAQSAQ PTGYTFSTTQ VKTKLPFLLK
510 520 530 540 550
HSLREYQHIG LDWLVTMYEK RLNGILADEM GLGKTIMTIA LLAHLACEKG
560 570 580 590 600
VWGPHLIVVP TSVMLNWETE FMKWCPAFKI LTYFGNAKER KLKRQGWSRP
610 620 630 640 650
NSFHVCITTY RLVIQDAKAF KRKKWKYLIL DEAHLIKNWK SQRWQTLLNF
660 670 680 690 700
NSKRRILLTG TPLQNDLMEL WSLMHFLMPH VFQSHQEFRD WFCNPITGMV
710 720 730 740 750
EGEDQVNKEL VDRLHNVLRP FLLRRLKKDV EKQLPGKFEH VIRCRLSKRQ
760 770 780 790 800
RNLYEDFMAS SDTQATLSSG NFFGLINVLM QLRKVCNHPD LFEGRPIVSS
810 820 830 840 850
FDMTGIKLHL SSAACSATAM GPFDGIDLGT LNLQFSRLSG TMTKWEAHEV
860 870 880 890 900
GMLKAPGPLI VELAGTGEDT WDRHQSKHKP SKEVRTVIQE IHSSLRDNRE
910 920 930 940 950
RQRRERLLAI SVLNEFRCNQ QPLYGADFLK SAEIIHPVYD VHKVNGNPRQ
960 970 980 990 1000
YLEFSSILSD IVQLPLTRCE SMIDLITAFV FAIPAARAPH PVAWCSHLIP
1010 1020 1030 1040 1050
ASIDLKQSIS EEVLQRANSM LVPLRPVFVR KQLFFPDRRL LQFDCGKLQE
1060 1070 1080 1090 1100
LAVLLRRLKS QGHRALIFTQ MTKMLDVLES FINLYGYTYM RLDGSTKPEQ
1110 1120 1130 1140 1150
RQVLMQRFNT NPKIFLFILS TRSGGVGINL VGADTVIFYD SDWNPAMDLQ
1160 1170 1180 1190 1200
AQDRCHRIGQ TREVHIYRLI SESTIEENIL KKANQKRILD DLVIQSGSYN
1210 1220 1230 1240 1250
TEFFKKLDPM ELFSGLKEIK VRGTPDKKLT SFITSSIKEL SNAEVDAALK
1260 1270 1280 1290 1300
NAEDEADYMA MKRVEQEEAA ENQEFTEELF AGNVDEEDLA DDLDESGKSR
1310 1320 1330 1340 1350
KLQTDIAGVD GSRVGERAPE DGGTAIITEV IPFGEFSILP ADPDEEMDML
1360 1370 1380 1390 1400
ADVRQMAAAA AASGRGSISF EDQLRPVERY AMRFLELWDP RVDSMAVVAQ
1410 1420 1430 1440 1450
VSFEEKEWEL DQLEKLKEEQ EAEMDEDNEP LFYETWDTAL ADEAYRQQVD
1460 1470 1480 1490 1500
ILAQQQVCKR ALKLRIKALA EAAATVRGAE NFTLKSKGKK KLKKAKFKTL
1510 1520 1530 1540 1550
AEGSLMTGTE DISIREEFQV DRSSDPSYRD QHSDMMLLPH RSLSQRKRKA
1560 1570 1580 1590 1600
PMLLKEEVRV EAHTKKLKKN HFGKDRRSSG STLQESVDQP GGLSNSGVHG
1610 1620 1630 1640 1650
GTVLAGKDKR GKLTILGMPP KKGPLIMLEK ERKKDSLRSQ DHLPPASPWT
1660 1670 1680 1690 1700
HGEDAVLCAV VHEYGGNWQL ASDALAGGPD GGVYRGRHRH PVYCRERFRE
1710 1720 1730 1740 1750
LLAQNAAAAS GDPVSERSAL SAATNAQLKV TEEHTKRLLN AVLQLPDKEL
1760 1770 1780
LLQRHFVAAL AAVEKWRKVA AKHGSEKLLT
Length:1,780
Mass (Da):202,227
Last modified:February 5, 2008 - v1
Checksum:i798C0BC53790A0BC
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1780Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544944 Genomic DNA. Translation: EDQ72602.1.
RefSeqiXP_001762479.1. XM_001762427.1.

Genome annotation databases

GeneIDi5925659.
KEGGippp:PHYPADRAFT_125588.

Similar proteinsi

Entry informationi

Entry nameiA9S832_PHYPA
AccessioniPrimary (citable) accession number: A9S832
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: June 7, 2017
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported