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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_181428

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_181428Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Partially assembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S49_154V6.1.

Structurei

3D structure databases

ProteinModelPortaliA9S5C6.
SMRiA9S5C6. Positions 41-497.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini51 – 379329Lyase_1InterPro annotationAdd
BLAST
Domaini445 – 49753FumaraseC_CInterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiKOG1317. Eukaryota.
COG0114. LUCA.
InParanoidiA9S5C6.
KOiK01679.
OMAiFAYLKKA.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00743. FumaraseC. 1 hit.
InterProiIPR005677. Fum_hydII.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00979. fumC_II. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9S5C6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLLTKMASA RRWMRVHSST AAASRNFTFQ FVRSLTGGGG FREERDTFGL
60 70 80 90 100
IQVPNDRYWG AQTQRSVQNF EIGGESERMP KQLVEALGIL KKCAAIVNME
110 120 130 140 150
YGLDKKFGEA IVKAASEVAQ GKLTDHFPLV VWQTGSGTQS NMNANEVIAN
160 170 180 190 200
RAGEIIGIPI GSKGVHPNDH VNMSQSSNDT FPTAMHIAAA IEATSRLLPH
210 220 230 240 250
LHALHEALIE KQNDFSDIVK IGRTHTQDAV PLTLGQVFSA YCTQVQYGIE
260 270 280 290 300
RVENTLPRLY QLAQGGTAVG TGLNTKKGFD KKFAAQVAKE TGLPFVTAPN
310 320 330 340 350
KFEALAAHDA IVECSGALNT VAVSLMKIAN DIRLLGSGPR CGLHELILPE
360 370 380 390 400
NEPGSSIMPG KVNPTQCEAL TMVCAQVMGN HTTITVAGSN GHFELNVYKP
410 420 430 440 450
VMINALLQSM VLLGDAAESF RKNCVVGIEA NRNHIDNLMR RSLMLVTALN
460 470 480 490 500
PKIGYDKAAA CAKKAHKEGT TLKEAAMSLG YLTSEEFDEW VDPKKMLGPS
Length:500
Mass (Da):54,161
Last modified:February 5, 2008 - v1
Checksum:iD0C6B000F2DA8702
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544938 Genomic DNA. Translation: EDQ73584.1.
RefSeqiXP_001761516.1. XM_001761464.1.
UniGeneiPpa.1391.

Genome annotation databases

EnsemblPlantsiPP1S49_154V6.1; PP1S49_154V6.1; PP1S49_154V6.
GeneIDi5924763.
GrameneiPP1S49_154V6.1; PP1S49_154V6.1; PP1S49_154V6.
KEGGippp:PHYPADRAFT_181428.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544938 Genomic DNA. Translation: EDQ73584.1.
RefSeqiXP_001761516.1. XM_001761464.1.
UniGeneiPpa.1391.

3D structure databases

ProteinModelPortaliA9S5C6.
SMRiA9S5C6. Positions 41-497.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3218.PP1S49_154V6.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiPP1S49_154V6.1; PP1S49_154V6.1; PP1S49_154V6.
GeneIDi5924763.
GrameneiPP1S49_154V6.1; PP1S49_154V6.1; PP1S49_154V6.
KEGGippp:PHYPADRAFT_181428.

Phylogenomic databases

eggNOGiKOG1317. Eukaryota.
COG0114. LUCA.
InParanoidiA9S5C6.
KOiK01679.
OMAiFAYLKKA.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00743. FumaraseC. 1 hit.
InterProiIPR005677. Fum_hydII.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00979. fumC_II. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA9S5C6_PHYPA
AccessioniPrimary (citable) accession number: A9S5C6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: September 7, 2016
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.