A9S4V0 (A9S4V0_PHYPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EDQ73738.1

Gene names

ORF Names:

PHYPADRAFT_105781 EMBL EDQ73738.1

Organism

Physcomitrella patens subsp. patens (Moss)

Taxonomic identifier

145481 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Bryophyta › Bryophytina › Bryopsida › Funariidae › Funariales › Funariaceae › Physcomitrella

Protein attributes

Sequence length	292 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S2P family. RuleBase RU003631

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS005707
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU003631
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9S4V0 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 2131F9C8EB1A206A	FASTA	292	31,388
	10 20 30 40 50 60 MKESDVQMML AADVHLGTKN CDFQMERYVW KRRSDGIFII NVGKTYEKLE LAARVIAAIE 70 80 90 100 110 120 NPQDIIVQSA RPYGQRAVLK FAQYTGCQAI AGRHTPGTFT NQLQNTFSEP RLLILTDPRT 130 140 150 160 170 180 DHQPIMEAAL GNIPVIAFCD TDSPMKYVDI AIPANNKGKH SIGALFWLLA RMVLQMRGTI 190 200 210 220 230 240 SAAHPWDVMV DLFFYREPDE GKDREEEEGG AAEFAAVEYA APTLALGGDA QWGPEAAEAG 250 260 270 280 290 QWETDAAAGA VPAGAPAGWD VGAAAAPVAP AGWDPAAPAE APVAPAGWEP AA

References

[1]

"The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants." Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y. , Hashimoto S., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L. Science 319:64-69(2008) [PubMed: 18079367] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Gransden 2004.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS544937 Genomic DNA. Translation: EDQ73738.1.
RefSeq	XP_001761349.1. XM_001761297.1.
UniGene	Ppa.5443.
3D structure databases
ProteinModelPortal	A9S4V0.
SMR	A9S4V0. Positions 1-196.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5924603.
KEGG	ppp:PHYPADRAFT_105781.
Phylogenomic databases
ProtClustDB	CLSN2679560.
Family and domain databases
InterPro	IPR001865. Ribosomal_S2. IPR018130. Ribosomal_S2_CS. IPR005707. Ribosomal_S2_euk/arc. IPR023591. Ribosomal_S2_flav_dom. [Graphical view]
KO	K02998.
PANTHER	PTHR11489. Ribosomal_S2_e/a. 1 hit.
Pfam	PF00318. Ribosomal_S2. 2 hits. [Graphical view]
PRINTS	PR00395. RIBOSOMALS2.
SUPFAM	SSF52313. Ribosomal_S2. 1 hit.
TIGRFAMs	TIGR01012. Sa_S2_E_A. 1 hit.
PROSITE	PS00963. RIBOSOMAL_S2_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9S4V0_PHYPA

Accession

Primary (citable) accession number: A9S4V0

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	November 16, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)