A9S177 (A9S177_PHYPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribosomal protein RuleBase RU000659

Gene names

ORF Names:

PHYPADRAFT_180214 EMBL EDQ75149.1

Organism

Physcomitrella patens subsp. patens (Moss) [Reference proteome]

Taxonomic identifier

145481 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Bryophyta › Bryophytina › Bryopsida › Funariidae › Funariales › Funariaceae › Physcomitrella › Physcomitrella patens

Protein attributes

Sequence length	216 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L1P family. RuleBase RU000659

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000659
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9S177 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 43AD574D8D136E6E	FASTA	216	24,625
	10 20 30 40 50 60 MSKLQSDVLR EAITQITTAA KEKNRKFTET VELQIGLKNY DPQKDKRFSG SVKLPHIPRP 70 80 90 100 110 120 KMRVCMLGDA QHVEEANKIG MEYMDVESLK KMNKNKKLVK KLAKKYHAFL ASESVIKQIP 130 140 150 160 170 180 RLLGPGLNKA GKFPTLVSHQ ESLESKGQEL KAMVKFQLKK VLCMGVAIGN CDMEEKQIFQ 190 200 210 NTQMGVNFLV SLLKKNWQNV RVLYLKTTMG TPVRIY

References

[1]

"The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants." Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y. , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L. Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Gransden 2004.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS544929 Genomic DNA. Translation: EDQ75149.1.
RefSeq	XP_001760024.1. XM_001759972.1.
UniGene	Ppa.3917.
3D structure databases
ProteinModelPortal	A9S177.
ModBase	Search...
Protein-protein interaction databases
STRING	3218.JGI180214.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	PP1S40_297V6.1; PP1S40_297V6.1; PP1S40_297V6.
GeneID	5923198.
KEGG	ppp:PHYPADRAFT_180214.
Phylogenomic databases
KO	K02865.
ProtClustDB	CLSN2687446.
Family and domain databases
Gene3D	3.30.190.20. 2 hits. 3.40.50.790. 1 hit.
InterPro	IPR002143. Ribosomal_L1. IPR016094. Ribosomal_L1_2-a/b-sand. IPR016095. Ribosomal_L1_3-a/b-sand. IPR023673. Ribosomal_L1_CS. IPR023674. Ribosomal_L1_SF. [Graphical view]
Pfam	PF00687. Ribosomal_L1. 1 hit. [Graphical view]
PIRSF	PIRSF002155. Ribosomal_L1. 1 hit.
SUPFAM	SSF56808. Ribosomal_L1. 1 hit.
PROSITE	PS01199. RIBOSOMAL_L1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9S177_PHYPA

Accession

Primary (citable) accession number: A9S177

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)