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Protein

Ribosomal protein

Gene

PHYPA_025334

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal proteinUniRule annotation
Gene namesi
ORF Names:PHYPA_025334Imported, PHYPADRAFT_180214Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
Proteomesi
  • UP000006727 Componenti: Chromosome 20

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PRIDEiA9S177

Interactioni

Protein-protein interaction databases

STRINGi3218.PP1S40_297V6.1

Structurei

3D structure databases

ProteinModelPortaliA9S177
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL1 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG1570 Eukaryota
COG0081 LUCA
InParanoidiA9S177
KOiK02865
OMAiIHLAINF

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.790, 1 hit
InterProiView protein in InterPro
IPR002143 Ribosomal_L1
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
IPR023673 Ribosomal_L1_CS
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 1 hit
PIRSFiPIRSF002155 Ribosomal_L1, 1 hit
SUPFAMiSSF56808 SSF56808, 1 hit
PROSITEiView protein in PROSITE
PS01199 RIBOSOMAL_L1, 1 hit

Sequencei

Sequence statusi: Complete.

A9S177-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKLQSDVLR EAITQITTAA KEKNRKFTET VELQIGLKNY DPQKDKRFSG
60 70 80 90 100
SVKLPHIPRP KMRVCMLGDA QHVEEANKIG MEYMDVESLK KMNKNKKLVK
110 120 130 140 150
KLAKKYHAFL ASESVIKQIP RLLGPGLNKA GKFPTLVSHQ ESLESKGQEL
160 170 180 190 200
KAMVKFQLKK VLCMGVAIGN CDMEEKQIFQ NTQMGVNFLV SLLKKNWQNV
210
RVLYLKTTMG TPVRIY
Length:216
Mass (Da):24,625
Last modified:February 5, 2008 - v1
Checksum:i43AD574D8D136E6E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544929 Genomic DNA Translation: EDQ75149.1
ABEU02000020 Genomic DNA Translation: PNR33390.1
RefSeqiXP_001760024.1, XM_001759972.1
UniGeneiPpa.3917

Genome annotation databases

EnsemblPlantsiPP1S40_297V6.1; PP1S40_297V6.1; PP1S40_297V6
GrameneiPP1S40_297V6.1; PP1S40_297V6.1; PP1S40_297V6
KEGGippp:PHYPADRAFT_180214

Similar proteinsi

Entry informationi

Entry nameiA9S177_PHYPA
AccessioniPrimary (citable) accession number: A9S177
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 23, 2018
This is version 61 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health