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A9RXP9

- A9RXP9_PHYPA

UniProt

A9RXP9 - A9RXP9_PHYPA

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Protein
Submitted name:

Predicted protein

Gene
PHYPADRAFT_105373
Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
  2. response to cadmium ion Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_105373Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: EnsemblPlants/Gramene
  2. nucleus Source: EnsemblPlants/Gramene
  3. plasmodesma Source: EnsemblPlants/Gramene
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI105373.

Structurei

3D structure databases

ProteinModelPortaliA9RXP9.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A9RXP9-1 [UniParc]FASTAAdd to Basket

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MVLSICKSMK ETKGHDTIDS MFASRYAQAE LPRFEIPTQE TPKDVAYQII    50
SDELMLDGNP RLNLASFVTT WMEPECDKLI MAALNKNYID MDEYPITTEL 100
QDRCVNMVAR LFNAPIGEGE QAVGAGTVGS SEAIMLAGLA FKRKWQLERK 150
AAGKPWDKPN MVTGANVQVC WEKFARYFEV ELREVTLKED YYVMDPHRAV 200
ELVDENTICV CAILGSTYNG EFEDVQLLND LLEKKNQELG LNVPIHVDAA 250
SGGFVVPFIY PDIVWDFRLP LVKSINVSGH KYGLVYAGIG WVVWRNKEDL 300
PEELIFHVNY LGADQPTFTL NFSKGASQVI AQYYQLIRLG FNGYKSIMTN 350
CAMNAKILTQ AIENLGRFKI LSKEVGVPLV AFSLLDSSNY TEFDISDGLR 400
RYGWTVPAYT MAPDAQHVTL LRVVVREDFS RSLANRLVTD IKRVLDHFDA 450
RPPKLIEVVT AAVAQENREA NLDLPTTPDA VKATAAFNDI VVEGHHGGKK 500
KQQHGHGHGH HGPIATTTAT AKTTTARNPP FTR 533
Length:533
Mass (Da):59,605
Last modified:February 5, 2008 - v1
Checksum:iC6ACFAFED00EDFBD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544923 Genomic DNA. Translation: EDQ76428.1.
RefSeqiXP_001758922.1. XM_001758870.1.
UniGeneiPpa.7594.

Genome annotation databases

GeneIDi5922121.
KEGGippp:PHYPADRAFT_105373.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544923 Genomic DNA. Translation: EDQ76428.1 .
RefSeqi XP_001758922.1. XM_001758870.1.
UniGenei Ppa.7594.

3D structure databases

ProteinModelPortali A9RXP9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI105373.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5922121.
KEGGi ppp:PHYPADRAFT_105373.

Phylogenomic databases

KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004.

Entry informationi

Entry nameiA9RXP9_PHYPA
AccessioniPrimary (citable) accession number: A9RXP9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 14, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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