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A9RXP9

- A9RXP9_PHYPA

UniProt

A9RXP9 - A9RXP9_PHYPA

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Protein

Glutamate decarboxylase

Gene

PHYPADRAFT_105373

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Note: Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:PHYPADRAFT_105373Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI105373.

Structurei

3D structure databases

ProteinModelPortaliA9RXP9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiA9RXP9.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

A9RXP9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVLSICKSMK ETKGHDTIDS MFASRYAQAE LPRFEIPTQE TPKDVAYQII
60 70 80 90 100
SDELMLDGNP RLNLASFVTT WMEPECDKLI MAALNKNYID MDEYPITTEL
110 120 130 140 150
QDRCVNMVAR LFNAPIGEGE QAVGAGTVGS SEAIMLAGLA FKRKWQLERK
160 170 180 190 200
AAGKPWDKPN MVTGANVQVC WEKFARYFEV ELREVTLKED YYVMDPHRAV
210 220 230 240 250
ELVDENTICV CAILGSTYNG EFEDVQLLND LLEKKNQELG LNVPIHVDAA
260 270 280 290 300
SGGFVVPFIY PDIVWDFRLP LVKSINVSGH KYGLVYAGIG WVVWRNKEDL
310 320 330 340 350
PEELIFHVNY LGADQPTFTL NFSKGASQVI AQYYQLIRLG FNGYKSIMTN
360 370 380 390 400
CAMNAKILTQ AIENLGRFKI LSKEVGVPLV AFSLLDSSNY TEFDISDGLR
410 420 430 440 450
RYGWTVPAYT MAPDAQHVTL LRVVVREDFS RSLANRLVTD IKRVLDHFDA
460 470 480 490 500
RPPKLIEVVT AAVAQENREA NLDLPTTPDA VKATAAFNDI VVEGHHGGKK
510 520 530
KQQHGHGHGH HGPIATTTAT AKTTTARNPP FTR
Length:533
Mass (Da):59,605
Last modified:February 5, 2008 - v1
Checksum:iC6ACFAFED00EDFBD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544923 Genomic DNA. Translation: EDQ76428.1.
RefSeqiXP_001758922.1. XM_001758870.1.
UniGeneiPpa.7594.

Genome annotation databases

GeneIDi5922121.
KEGGippp:PHYPADRAFT_105373.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544923 Genomic DNA. Translation: EDQ76428.1 .
RefSeqi XP_001758922.1. XM_001758870.1.
UniGenei Ppa.7594.

3D structure databases

ProteinModelPortali A9RXP9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI105373.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5922121.
KEGGi ppp:PHYPADRAFT_105373.

Phylogenomic databases

InParanoidi A9RXP9.
KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.

Entry informationi

Entry nameiA9RXP9_PHYPA
AccessioniPrimary (citable) accession number: A9RXP9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 26, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3