A9RTU1 (A9RTU1_PHYPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EDQ77654.1

Gene names

ORF Names:

PHYPADRAFT_160947 EMBL EDQ77654.1

Organism

Physcomitrella patens subsp. patens (Moss) [Reference proteome]

Taxonomic identifier

145481 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Bryophyta › Bryophytina › Bryopsida › Funariidae › Funariales › Funariaceae › Physcomitrella › Physcomitrella patens

Protein attributes

Sequence length	109 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translational elongation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9RTU1 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: A8BE87CA128B9EB5	FASTA	109	11,217
	10 20 30 40 50 60 MSVSELACTY ASLILHDDGI AITADKIAAL VKAANVQVEG YWPGLFAKLC EKRSVDDLIT 70 80 90 100 NVGGGGGGAV AVSAAPAASA AAEAAPKEEE KKEEPKEESD DDMGFSLFD

References

[1]

"The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants." Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y. , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L. Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Gransden 2004.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS544917 Genomic DNA. Translation: EDQ77654.1.
RefSeq	XP_001757597.1. XM_001757545.1.
UniGene	Ppa.8590.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	3218.JGI160947.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	PP1S28_131V6.2; PP1S28_131V6.2; PP1S28_131V6.
GeneID	5920694.
KEGG	ppp:PHYPADRAFT_160947.
Phylogenomic databases
KO	K02942.
ProtClustDB	CLSN2705590.
Family and domain databases
InterPro	IPR001813. Ribosomal_60S. [Graphical view]
Pfam	PF00428. Ribosomal_60s. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9RTU1_PHYPA

Accession

Primary (citable) accession number: A9RTU1

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)