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A9RSL5

- A9RSL5_PHYPA

UniProt

A9RSL5 - A9RSL5_PHYPA

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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_118724

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. carbon-sulfur lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_118724Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI118724.

Structurei

3D structure databases

ProteinModelPortaliA9RSL5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiA9RSL5.
KOiK16903.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Fragment.

A9RSL5-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
DGCVGINSGD PTLFEEYWLT QPDAPTIIPS WQGLSYFAHR HNSYLFVDSF
60 70 80 90 100
LEQTIRQLHG MIGNAVTEGR FLVLGVGSTQ LYQAALYALT SPDSPTPTSV
110 120 130 140 150
VSAIPHYSSF EGVTRFLDSR RFKWIGDAEK FRDSGTSEPY IELVTSPNNP
160 170 180 190 200
CGSMNKAVVN GNGSVINDLA YYWPHYTPIT APADYPIMLW TLSKITGHAG
210 220 230 240 250
TRLGWAIVED EKIATKMAFF VQMNTLGVSQ DAQARGVTLL RSITSSYNTR
260 270 280 290 300
PERQPFFHLS QAVLEDRWAR MSQALQNSSR FVLPEFEPAS CSFFGRAFQP
310 320 330 340 350
NPPFMWLKCK VDEDCAQLLK DHKIISRGGR AFGVSTQYVR VSMLDRRPLF
360
DLLLSRLAAL H
Length:361
Mass (Da):40,452
Last modified:February 5, 2008 - v1
Checksum:iC1DA8021A3BFB0CA
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544915 Genomic DNA. Translation: EDQ78046.1.
RefSeqiXP_001757187.1. XM_001757135.1.
UniGeneiPpa.12570.

Genome annotation databases

GeneIDi5920379.
KEGGippp:PHYPADRAFT_118724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544915 Genomic DNA. Translation: EDQ78046.1 .
RefSeqi XP_001757187.1. XM_001757135.1.
UniGenei Ppa.12570.

3D structure databases

ProteinModelPortali A9RSL5.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI118724.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5920379.
KEGGi ppp:PHYPADRAFT_118724.

Phylogenomic databases

InParanoidi A9RSL5.
KOi K16903.

Family and domain databases

Gene3Di 2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF04864. Alliinase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.

Entry informationi

Entry nameiA9RSL5_PHYPA
AccessioniPrimary (citable) accession number: A9RSL5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 29, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3