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Protein
Submitted name:

Predicted protein

Gene

PHYPADRAFT_204939

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Predicted proteinImported
Gene namesi
ORF Names:PHYPADRAFT_204939Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727 Componenti: Partially assembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliA9RR67.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiA9RR67.
OMAiFLEPYWM.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
PF04863. EGF_alliinase. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A9RR67-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEADDTSARL LPLASWQSTH KNSTEAKFSL RNVVLYVSLL VNLPALVIVF
60 70 80 90 100
HPIQGFLWTP PRSEQPAAPQ WAEAVQAAER AASKWCSGNG NVFVDTVGID
110 120 130 140 150
ADGSPSCECN DCFAGPDCSL PLPDCVADAI SGDPLLFEAY WRKNSDLGAV
160 170 180 190 200
VIPAWYRMGY QTRDVTSMPY TEALVASIRE LHAMVGNAVT EGRYIAFGTG
210 220 230 240 250
STQLINAVIH SLALQDPGRV TPVVSKAPYY NAYYTQTEYF KSPFYSFSGE
260 270 280 290 300
PDRKVGQQGP AQIEVIASPN NPTTQIQEVP QNVSGHVVYD HAYYWPHLTP
310 320 330 340 350
ITKAVDYDIM LFTLSKLTGH AGSRIGWVIL KDFDLYTKVL RYADVSTIGL
360 370 380 390 400
GHEAQLRASQ LIRTIIDGYS EGNSGREGIF HFAHDVLQSR WAKLQAIFQN
410 420 430 440 450
VSRFSLQELK PGYCSFFKRV SDPSPGYAWI RCNREEDADC SAVLLSAGII
460 470 480
GRAGPIFGTT PRYVRLSLLK RASHFDNLAD HLLKLVAQS
Length:489
Mass (Da):53,966
Last modified:February 5, 2008 - v1
Checksum:iD4068418801CE825
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544912 Genomic DNA. Translation: EDQ78647.1.
RefSeqiXP_001756693.1. XM_001756641.1.
UniGeneiPpa.3437.

Genome annotation databases

GeneIDi5919793.
KEGGippp:PHYPADRAFT_204939.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS544912 Genomic DNA. Translation: EDQ78647.1.
RefSeqiXP_001756693.1. XM_001756641.1.
UniGeneiPpa.3437.

3D structure databases

ProteinModelPortaliA9RR67.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi5919793.
KEGGippp:PHYPADRAFT_204939.

Phylogenomic databases

InParanoidiA9RR67.
OMAiFLEPYWM.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
PF04863. EGF_alliinase. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.

Entry informationi

Entry nameiA9RR67_PHYPA
AccessioniPrimary (citable) accession number: A9RR67
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: January 7, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.