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A9RI73

- A9RI73_PHYPA

UniProt

A9RI73 - A9RI73_PHYPA

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Protein

Glutamate decarboxylase

Gene

PHYPADRAFT_50856

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
ORF Names:PHYPADRAFT_50856Imported
OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
Taxonomic identifieri3218 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
ProteomesiUP000006727: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi3218.JGI50856.

Structurei

3D structure databases

ProteinModelPortaliA9RI73.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

InParanoidiA9RI73.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Fragment.

A9RI73-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVLTQSRSMK DSNTHTIDSM FATRYVQAPL PRWRLPDNET PKDAASQVIN
60 70 80 90 100
DELMLDGNPR LNLASFVTTW MEPECDKLIQ KSLNKNYIDM DEYPITTEIQ
110 120 130 140 150
DRCVNMIAHL FKAPLDDGQP AVGAGTVGSS EAIMLAGLAF KRKWQLQRRA
160 170 180 190 200
AGLPCDKPNM VTGANVQVCW EKFANYFEVE IRAVKLREDY YVMDPAKAVE
210 220 230 240 250
MCDENTICVC AILGSTYNGE FEDVATLNNL LEKKNKENGW NIPIHVDAAS
260 270 280 290 300
GGFVAPFMYP DLVWDFRLPL VKSINVSGHK YGLVYAGIGW VVWRSKEDLP
310 320 330 340 350
EELVFHVNYL GADQPTFTLN FSKGASHVIA QYYQFIRLGF EGYKKINMNC
360 370 380 390 400
AENAKFLADG IVATGRFKLL SKPVGVPLIA FSLTDRSRFD EYDIADGLRR
410 420 430 440 450
YGWTVPAYTM APDAQQITLL RVVVREDFSR SLADRLMTDL KRTLETLDSQ

PPKLV
Length:455
Mass (Da):51,362
Last modified:February 5, 2008 - v1
Checksum:i18D568A2F2FEEBA8
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei455 – 4551Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544899 Genomic DNA. Translation: EDQ81509.1.
RefSeqiXP_001753757.1. XM_001753705.1.
UniGeneiPpa.15263.

Genome annotation databases

GeneIDi5916876.
KEGGippp:PHYPADRAFT_50856.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS544899 Genomic DNA. Translation: EDQ81509.1 .
RefSeqi XP_001753757.1. XM_001753705.1.
UniGenei Ppa.15263.

3D structure databases

ProteinModelPortali A9RI73.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3218.JGI50856.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 5916876.
KEGGi ppp:PHYPADRAFT_50856.

Phylogenomic databases

InParanoidi A9RI73.
KOi K01580.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
    Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
    , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
    Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Gransden 2004Imported.

Entry informationi

Entry nameiA9RI73_PHYPA
AccessioniPrimary (citable) accession number: A9RI73
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 29, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3