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A9RGP7

- A9RGP7_PHYPA

UniProt

A9RGP7 - A9RGP7_PHYPA

Protein

Glutamate decarboxylase

Gene

PHYPADRAFT_174716

Organism
Physcomitrella patens subsp. patens (Moss)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    ORF Names:PHYPADRAFT_174716Imported
    OrganismiPhyscomitrella patens subsp. patens (Moss)Imported
    Taxonomic identifieri3218 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaBryophytaBryophytinaBryopsidaFunariidaeFunarialesFunariaceaePhyscomitrella
    ProteomesiUP000006727: Partially assembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi3218.JGI174716.

    Structurei

    3D structure databases

    ProteinModelPortaliA9RGP7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A9RGP7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVLSELKGMK EVDSSNVDSI YASRYVQNEL PRWSLPEREF PKDAAYQVIA    50
    DELMLDGNPR LNFASFVTTW MEPECDKLML GALSKNYIDM DEYPITTELQ 100
    DRCVNMIARL FNASLEEGQT AIGAGTVGSS EAIMLAGLAF KRKWQLERKA 150
    KGLPFDKPNM VTGANVHVVW EKFANYFEVE LRAVKLREDY YVMDPAKAVE 200
    MCDENTICVS AILGSTYNGE FEDVETLNNL LEKKNKEKGW HIPIHVDAAS 250
    GGFVAPFLYP DLVWDFRLPL VKSINVSGHK YGLVYPGVGW VVWRSKEDLP 300
    EELIFHVNYL GADQPTFTLN FSKGASQIIA QYYQFIRLGF EGYSKIIANC 350
    AKNAKTLAES IVATGRFKLL SKPQGVPLVA FSLKDKRKFD EFDIADGLRR 400
    HGWTVSAYTM APDAQQTTLL RVVVREDFSR GLSDRLVEDL KKVLKTLDSQ 450
    PAKLVQAVAE VIQEQHHELA NSNATVEDIK QTVEHDVPFH EMVKKLSDAH 500
    NHRKKAQAHK LHSIHKTNGV C 521
    Length:521
    Mass (Da):58,825
    Last modified:February 5, 2008 - v1
    Checksum:iE573EFEFF6988BAC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS544897 Genomic DNA. Translation: EDQ81944.1.
    RefSeqiXP_001753315.1. XM_001753263.1.
    UniGeneiPpa.14345.

    Genome annotation databases

    GeneIDi5916425.
    KEGGippp:PHYPADRAFT_174716.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS544897 Genomic DNA. Translation: EDQ81944.1 .
    RefSeqi XP_001753315.1. XM_001753263.1.
    UniGenei Ppa.14345.

    3D structure databases

    ProteinModelPortali A9RGP7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3218.JGI174716.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 5916425.
    KEGGi ppp:PHYPADRAFT_174716.

    Phylogenomic databases

    KOi K01580.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants."
      Rensing S.A., Lang D., Zimmer A.D., Terry A., Salamov A., Shapiro H., Nishiyama T., Perroud P.-F., Lindquist E.A., Kamisugi Y., Tanahashi T., Sakakibara K., Fujita T., Oishi K., Shin-I T., Kuroki Y., Toyoda A., Suzuki Y.
      , Hashimoto S.-I., Yamaguchi K., Sugano A., Kohara Y., Fujiyama A., Anterola A., Aoki S., Ashton N., Barbazuk W.B., Barker E., Bennetzen J.L., Blankenship R., Cho S.H., Dutcher S.K., Estelle M., Fawcett J.A., Gundlach H., Hanada K., Heyl A., Hicks K.A., Hughes J., Lohr M., Mayer K., Melkozernov A., Murata T., Nelson D.R., Pils B., Prigge M., Reiss B., Renner T., Rombauts S., Rushton P.J., Sanderfoot A., Schween G., Shiu S.-H., Stueber K., Theodoulou F.L., Tu H., Van de Peer Y., Verrier P.J., Waters E., Wood A., Yang L., Cove D., Cuming A.C., Hasebe M., Lucas S., Mishler B.D., Reski R., Grigoriev I.V., Quatrano R.S., Boore J.L.
      Science 319:64-69(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Gransden 2004Imported.

    Entry informationi

    Entry nameiA9RGP7_PHYPA
    AccessioniPrimary (citable) accession number: A9RGP7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3