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Protein
Submitted name:

Nucleoside triphosphatase, D5 family

Gene

YpAngola_A3860

Organism
Yersinia pestis bv. Antiqua (strain Angola)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: InterPro
  2. DNA primase activity Source: InterPro
  3. helicase activity Source: UniProtKB-KW
  4. zinc ion binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciYPES349746:GHPB-3871-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleoside triphosphatase, D5 familyImported (EC:3.6.1.15Imported)
Gene namesi
Ordered Locus Names:YpAngola_A3860Imported
OrganismiYersinia pestis bv. Antiqua (strain Angola)Imported
Taxonomic identifieri349746 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia
ProteomesiUP000001204 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi349746.YpAngola_A3860.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4643.
HOGENOMiHOG000266550.
KOiK06919.
OMAiYDGERWD.
OrthoDBiEOG6W9X43.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.40.50.300. 1 hit.
3.90.580.10. 1 hit.
InterProiIPR004968. DNA_primase/NTPase_C.
IPR014015. Helicase_SF3_DNA-vir.
IPR027417. P-loop_NTPase.
IPR014818. Phage/plasmid_primase_P4_C.
IPR013237. Phage_T7_Gp4_N.
IPR006171. Toprim_domain.
IPR011991. WHTH_DNA-bd_dom.
IPR002694. Znf_CHC2.
[Graphical view]
PfamiPF08706. D5_N. 1 hit.
PF03288. Pox_D5. 1 hit.
PF08273. Prim_Zn_Ribbon. 1 hit.
[Graphical view]
SMARTiSM00885. D5_N. 1 hit.
SM00778. Prim_Zn_Ribbon. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51206. SF3_HELICASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9R4N1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNQFITEVAA QARGKWGFIL DALAISHSKQ HSPCPACGGK DRFRFDDRQG
60 70 80 90 100
AGTWFCNQCE PQSGDGLDLV KNVRQCSLTE AAQLVADILG VSPKSKAPDL
110 120 130 140 150
ASLMAKTTPG ESRYLINKGL SSHKLPILPD GSLLLILQNM AGDCTGAQII
160 170 180 190 200
RPDGTKKLIA GSRKKGTFIP LKPLPEQAET VVLAEGYATA QSLELLLPAA
210 220 230 240 250
VIIAAIDAGN LLPVAQAFRI YWPAAKIIIA ADNDINPQDT ANVGQLSAEK
260 270 280 290 300
AANAVNGWVT LPPTPHKADW DDYRQQAGTG QARNSFYHGL YQPPPVSQLA
310 320 330 340 350
ENKGLHPTLS QMAASQRGQL LAEHYGQIAV HAESETVYHY DDERWDKLPD
360 370 380 390 400
GVLRRELVMI FNANDTPYSP AGIRNAIEAM KLQIPIMGEP PRHLIGFQNG
410 420 430 440 450
VYDLKAKQFR PHRANDWLQH HNDIIFTEPQ PDENLAHHAP HFTKWLAHAA
460 470 480 490 500
NDELPKMARI KAALFMILSN RFDWQLFLEV TGEGGSGKSV FTYIATLLAG
510 520 530 540 550
RQNTASGNMA ALDQARGRAQ FVGKSLITLP DQVKYVGEGA GIKAITGGDL
560 570 580 590 600
VEIDGKYEKQ FSTLLTAVVL ATNNEPMSFT ERQGGIARRR VIFAFNHPVK
610 620 630 640 650
EADKDPLIGE KIAAELPVVI RCLLAEFADQ DKARKLLLEQ RDSREAMGVK
660 670 680 690 700
RDADPLYGFC AHIVELGEAV GMYMGTLAIS PHAPRIYLYH AYLAYMEAYG
710 720 730 740 750
HQRSLSLTKF GKDFPKVMEE FGAEYKKART DKGFRYNMDL SDTANDWLPA
760
LALPHHPQPE EPH
Length:763
Mass (Da):83,992
Last modified:February 5, 2008 - v1
Checksum:iE3C346D0457C5237
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000901 Genomic DNA. Translation: ABX86966.1.
RefSeqiYP_001608164.1. NC_010159.1.

Genome annotation databases

EnsemblBacteriaiABX86966; ABX86966; YpAngola_A3860.
KEGGiypg:YpAngola_A3860.
PATRICi18577465. VBIYerPes97331_4483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000901 Genomic DNA. Translation: ABX86966.1.
RefSeqiYP_001608164.1. NC_010159.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi349746.YpAngola_A3860.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX86966; ABX86966; YpAngola_A3860.
KEGGiypg:YpAngola_A3860.
PATRICi18577465. VBIYerPes97331_4483.

Phylogenomic databases

eggNOGiCOG4643.
HOGENOMiHOG000266550.
KOiK06919.
OMAiYDGERWD.
OrthoDBiEOG6W9X43.

Enzyme and pathway databases

BioCyciYPES349746:GHPB-3871-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
3.40.50.300. 1 hit.
3.90.580.10. 1 hit.
InterProiIPR004968. DNA_primase/NTPase_C.
IPR014015. Helicase_SF3_DNA-vir.
IPR027417. P-loop_NTPase.
IPR014818. Phage/plasmid_primase_P4_C.
IPR013237. Phage_T7_Gp4_N.
IPR006171. Toprim_domain.
IPR011991. WHTH_DNA-bd_dom.
IPR002694. Znf_CHC2.
[Graphical view]
PfamiPF08706. D5_N. 1 hit.
PF03288. Pox_D5. 1 hit.
PF08273. Prim_Zn_Ribbon. 1 hit.
[Graphical view]
SMARTiSM00885. D5_N. 1 hit.
SM00778. Prim_Zn_Ribbon. 1 hit.
SM00493. TOPRIM. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
PROSITEiPS51206. SF3_HELICASE_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the deep-rooted Yersinia pestis strain Angola reveals new insights into the evolution and pangenome of the plague bacterium."
    Eppinger M., Worsham P.L., Nikolich M.P., Riley D.R., Sebastian Y., Mou S., Achtman M., Lindler L.E., Ravel J.
    J. Bacteriol. 192:1685-1699(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AngolaImported.

Entry informationi

Entry nameiA9R4N1_YERPG
AccessioniPrimary (citable) accession number: A9R4N1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 29, 2015
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.