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Protein
Submitted name:

Ribulose bisphosphate carboxylase small subunit

Gene

cbbS

Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose bisphosphate carboxylase small subunitImported
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunitImported
Gene namesi
Name:cbbSImported
Synonyms:rbcSImported
Ordered Locus Names:Minf_1263Imported
OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
Taxonomic identifieri481448 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
Proteomesi
  • UP000009149 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi481448.Minf_1263.

Structurei

3D structure databases

ProteinModelPortaliA9QPF8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 103RuBisCO_smallInterPro annotationAdd BLAST100

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141331.
KOiK01602.
OMAiWEMWGNP.
OrthoDBiPOG091H13LH.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.

Sequencei

Sequence statusi: Complete.

A9QPF8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRITQGTFSY LPDLTDEEIA AQVQYIIDQG WSIMIEYTDN PHPRHTYWDM
60 70 80 90 100
WGLPLFDIKD PAAVMQELNE CRKAYPNHYI RISGYNRQQG YQTTMISFIC
110 120 130 140
NRPKEEPGFE LVRTEWADRQ QKYQLKPYAI DKPKGQRYKS
Length:140
Mass (Da):16,717
Last modified:February 5, 2008 - v1
Checksum:iE95FBA11AB293F95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU223874 Genomic DNA. Translation: ABX56616.1.
CP000975 Genomic DNA. Translation: ACD83317.1.
RefSeqiWP_012463599.1. NC_010794.1.

Genome annotation databases

EnsemblBacteriaiACD83317; ACD83317; Minf_1263.
KEGGimin:Minf_1263.
PATRICi22491665. VBIMetInf111569_1319.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU223874 Genomic DNA. Translation: ABX56616.1.
CP000975 Genomic DNA. Translation: ACD83317.1.
RefSeqiWP_012463599.1. NC_010794.1.

3D structure databases

ProteinModelPortaliA9QPF8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi481448.Minf_1263.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACD83317; ACD83317; Minf_1263.
KEGGimin:Minf_1263.
PATRICi22491665. VBIMetInf111569_1319.

Phylogenomic databases

eggNOGiENOG4108VFZ. Bacteria.
COG4451. LUCA.
HOGENOMiHOG000141331.
KOiK01602.
OMAiWEMWGNP.
OrthoDBiPOG091H13LH.

Family and domain databases

Gene3Di3.30.190.10. 1 hit.
InterProiIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamiPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTiSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMiSSF55239. SSF55239. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA9QPF8_METI4
AccessioniPrimary (citable) accession number: A9QPF8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 2, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.