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A9QPF8

- A9QPF8_METI4

UniProt

A9QPF8 - A9QPF8_METI4

Protein
Submitted name:

Ribulose bisphosphate carboxylase small subunit

Gene

cbbS

Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 46 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    Enzyme and pathway databases

    BioCyciMINF481448:GJEI-1288-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose bisphosphate carboxylase small subunitImported
    Submitted name:
    Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunitImported
    Gene namesi
    Name:cbbSImported
    Synonyms:rbcSImported
    Ordered Locus Names:Minf_1263Imported
    OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
    Taxonomic identifieri481448 [NCBI]
    Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
    ProteomesiUP000009149: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi481448.Minf_1263.

    Structurei

    3D structure databases

    SMRiA9QPF8. Positions 1-138.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG4451.
    HOGENOMiHOG000141331.
    KOiK01602.
    OMAiQITKQVQ.
    OrthoDBiEOG6RC3Q7.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR000894. RuBisCO_sc_dom.
    [Graphical view]
    PfamiPF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    SMARTiSM00961. RuBisCO_small. 1 hit.
    [Graphical view]
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A9QPF8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRITQGTFSY LPDLTDEEIA AQVQYIIDQG WSIMIEYTDN PHPRHTYWDM    50
    WGLPLFDIKD PAAVMQELNE CRKAYPNHYI RISGYNRQQG YQTTMISFIC 100
    NRPKEEPGFE LVRTEWADRQ QKYQLKPYAI DKPKGQRYKS 140
    Length:140
    Mass (Da):16,717
    Last modified:February 5, 2008 - v1
    Checksum:iE95FBA11AB293F95
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    EU223874 Genomic DNA. Translation: ABX56616.1.
    CP000975 Genomic DNA. Translation: ACD83317.1.
    RefSeqiYP_001939915.1. NC_010794.1.

    Genome annotation databases

    EnsemblBacteriaiACD83317; ACD83317; Minf_1263.
    GeneIDi6352198.
    KEGGimin:Minf_1263.
    PATRICi22491665. VBIMetInf111569_1319.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    EU223874 Genomic DNA. Translation: ABX56616.1 .
    CP000975 Genomic DNA. Translation: ACD83317.1 .
    RefSeqi YP_001939915.1. NC_010794.1.

    3D structure databases

    SMRi A9QPF8. Positions 1-138.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 481448.Minf_1263.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACD83317 ; ACD83317 ; Minf_1263 .
    GeneIDi 6352198.
    KEGGi min:Minf_1263.
    PATRICi 22491665. VBIMetInf111569_1319.

    Phylogenomic databases

    eggNOGi COG4451.
    HOGENOMi HOG000141331.
    KOi K01602.
    OMAi QITKQVQ.
    OrthoDBi EOG6RC3Q7.

    Enzyme and pathway databases

    BioCyci MINF481448:GJEI-1288-MONOMER.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR000894. RuBisCO_sc_dom.
    [Graphical view ]
    Pfami PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    SMARTi SM00961. RuBisCO_small. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: V4Imported.
    2. "Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
      Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F.
      , Feng L., Wang L., Alam M.
      Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Isolate V4Imported and V4Imported.

    Entry informationi

    Entry nameiA9QPF8_METI4
    AccessioniPrimary (citable) accession number: A9QPF8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 46 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3