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A9QPF8 (A9QPF8_METI4) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit EMBL ABX56616.1
Gene names
Name:cbbS EMBL ABX56616.1
Synonyms:rbcS EMBL ACD83317.1
Ordered Locus Names:Minf_1263 EMBL ACD83317.1
OrganismMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4)) [Complete proteome] [HAMAP] EMBL ABX56616.1
Taxonomic identifier481448 [NCBI]
Taxonomic lineageBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum

Protein attributes

Sequence length140 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
A9QPF8 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: E95FBA11AB293F95

FASTA14016,717
        10         20         30         40         50         60 
MRITQGTFSY LPDLTDEEIA AQVQYIIDQG WSIMIEYTDN PHPRHTYWDM WGLPLFDIKD 

        70         80         90        100        110        120 
PAAVMQELNE CRKAYPNHYI RISGYNRQQG YQTTMISFIC NRPKEEPGFE LVRTEWADRQ 

       130        140 
QKYQLKPYAI DKPKGQRYKS 

« Hide

References

« Hide 'large scale' references
[1]"Methane oxidation by an extremely acidophilic bacterium of the phylum Verrucomicrobia."
Dunfield P.F., Yuryev A., Senin P., Smirnova A.V., Stott M.B., Hou S., Ly B., Saw J.H., Zhou Z., Ren Y., Wang J., Mountain B.W., Crowe M.A., Weatherby T.M., Bodelier P.L.E., Liesack W., Feng L., Wang L., Alam M.
Nature 450:879-882(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: V4 EMBL ABX56616.1.
[2]"Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F. expand/collapse author list , Feng L., Wang L., Alam M.
Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Isolate V4 and V4 EMBL ACD83317.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU223874 Genomic DNA. Translation: ABX56616.1.
CP000975 Genomic DNA. Translation: ACD83317.1.
RefSeqYP_001939915.1. NC_010794.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING481448.Minf_1263.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACD83317; ACD83317; Minf_1263.
GeneID6352198.
KEGGmin:Minf_1263.
PATRIC22491665. VBIMetInf111569_1319.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4451.
HOGENOMHOG000141331.
KOK01602.
OMAQITKQVQ.
OrthoDBEOG6RC3Q7.

Enzyme and pathway databases

BioCycMINF481448:GJEI-1288-MONOMER.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR000894. RuBisCO_sc_dom.
[Graphical view]
PfamPF00101. RuBisCO_small. 1 hit.
[Graphical view]
SMARTSM00961. RuBisCO_small. 1 hit.
[Graphical view]
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9QPF8_METI4
AccessionPrimary (citable) accession number: A9QPF8
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: July 9, 2014
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)