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A9QPD2

- A9QPD2_METI4

UniProt

A9QPD2 - A9QPD2_METI4

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei161 – 1611UniRule annotation
Active sitei589 – 5891UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciMINF481448:GJEI-1776-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:Minf_1739Imported
OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
Taxonomic identifieri481448 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
ProteomesiUP000009149: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi481448.Minf_1739.

Structurei

3D structure databases

ProteinModelPortaliA9QPD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiFADGRMD.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9QPD2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSVRKQLSSL QRISPEHDFS LLSRTIHFLG DTLGKVITQL EGEKILSIEE
60 70 80 90 100
TIRKLAKESR KGKEEATRKL SDIVRGLDID MAYRMAMAFT CYFELVNLAE
110 120 130 140 150
ENYRVRILMK RRINQLNHPQ KAIPKESIES AISQLKKAKV KKEEIQEILE
160 170 180 190 200
KMEIVLVFTA HPTEIKRQTI LNKLCEISSY LKKESFNSKP SPAIHSTVER
210 220 230 240 250
LIASLWLTER SRSKNPQVLD EVRTGLWYFE HTLWDVIPEL HNELQRVLDI
260 270 280 290 300
YYPGVTLKPK WISFGSWIGG DRDGNFQVTT KTTATTFILQ RNLALRKVSQ
310 320 330 340 350
SLERLSEIFS ISSQRIPPTK KVIRLLNEKL KSFPSLKEEY ERYPNEPYRL
360 370 380 390 400
VLLALKKEVE NSINKISEND LLDFFHDCKP DTTLKAITEV LEALKENFDA
410 420 430 440 450
PQTRIFLEGE FQKLAQCIEV FGIHIFSLDI RQHSAIHEEA IEEILRLNGH
460 470 480 490 500
PEISYALLDE KEKVGLLNKL LEGPLPSLHS LYNRASDKLK EVLGPILVFS
510 520 530 540 550
RSIAILGKEV CGCYLISMTS GLSDILEVLY LCKICRCSID IAPLFETLSD
560 570 580 590 600
LKSSPQTLQD LLSHPLYRKY LQERSDKQIV MLGYSDSNKD CGYMTSNWWL
610 620 630 640 650
FQIQEKLHEV CRVHGVSLVL FHGRGGTIAR GGGPAAKAIL AQPKGLLEGK
660 670 680 690 700
IRITEQGEVL STRYHDFDIA FRILEQTTYG VLLAIHKSRK KTILPKSWEK
710 720 730 740 750
TIECIAEESY RAYTHLLHQE PDFLRFWQEV TPINEIGSLK IASRPIFRFR
760 770 780 790 800
LNNFEDLRAI PWVFSWMQTR FVIPGWYGIG SSLKKVIETS PKALSILQKM
810 820 830 840 850
YEKWTFFQTV IDNAQLSLAK TDIDIARLYC DLASDKNLAQ RIFSIIEAEY
860 870 880 890 900
KKTVETILKI TLQNNILDHE PILQRSIQLR NPYVDPLNYI QVEMIKRNRA
910 920 930
GQPPTALEID KIKSVIELTI NGISAGLRNT G
Length:931
Mass (Da):107,056
Last modified:February 5, 2008 - v1
Checksum:i7AA27B536340B1FD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU223848 Genomic DNA. Translation: ABX56590.1.
CP000975 Genomic DNA. Translation: ACD83793.1.
RefSeqiYP_001940391.1. NC_010794.1.

Genome annotation databases

EnsemblBacteriaiACD83793; ACD83793; Minf_1739.
GeneIDi6352685.
KEGGimin:Minf_1739.
PATRICi22492655. VBIMetInf111569_1803.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU223848 Genomic DNA. Translation: ABX56590.1 .
CP000975 Genomic DNA. Translation: ACD83793.1 .
RefSeqi YP_001940391.1. NC_010794.1.

3D structure databases

ProteinModelPortali A9QPD2.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 481448.Minf_1739.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD83793 ; ACD83793 ; Minf_1739 .
GeneIDi 6352685.
KEGGi min:Minf_1739.
PATRICi 22492655. VBIMetInf111569_1803.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi FADGRMD.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci MINF481448:GJEI-1776-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: V4Imported.
  2. "Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
    Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F.
    , Feng L., Wang L., Alam M.
    Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate V4Imported and V4Imported.

Entry informationi

Entry nameiA9QPD2_METI4
AccessioniPrimary (citable) accession number: A9QPD2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 29, 2014
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3