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A9QPD2

- A9QPD2_METI4

UniProt

A9QPD2 - A9QPD2_METI4

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Protein
Phosphoenolpyruvate carboxylase
Gene
ppc, Minf_1739
Organism
Methylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotations

Cofactori

Magnesium By similarity.UniRule annotationSAAS annotations

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei161 – 1611 By similarityUniRule annotation
Active sitei589 – 5891 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotations

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciMINF481448:GJEI-1776-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:Minf_1739Imported
OrganismiMethylacidiphilum infernorum (isolate V4) (Methylokorus infernorum (strain V4))Imported
Taxonomic identifieri481448 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaunclassified VerrucomicrobiaMethylacidiphilalesMethylacidiphilaceaeMethylacidiphilum
ProteomesiUP000009149: Chromosome

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi481448.Minf_1739.

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2352.
HOGENOMiHOG000238647.
KOiK01595.
OMAiFADGRMD.
OrthoDBiEOG6TJ7T8.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9QPD2-1 [UniParc]FASTAAdd to Basket

« Hide

MSVRKQLSSL QRISPEHDFS LLSRTIHFLG DTLGKVITQL EGEKILSIEE    50
TIRKLAKESR KGKEEATRKL SDIVRGLDID MAYRMAMAFT CYFELVNLAE 100
ENYRVRILMK RRINQLNHPQ KAIPKESIES AISQLKKAKV KKEEIQEILE 150
KMEIVLVFTA HPTEIKRQTI LNKLCEISSY LKKESFNSKP SPAIHSTVER 200
LIASLWLTER SRSKNPQVLD EVRTGLWYFE HTLWDVIPEL HNELQRVLDI 250
YYPGVTLKPK WISFGSWIGG DRDGNFQVTT KTTATTFILQ RNLALRKVSQ 300
SLERLSEIFS ISSQRIPPTK KVIRLLNEKL KSFPSLKEEY ERYPNEPYRL 350
VLLALKKEVE NSINKISEND LLDFFHDCKP DTTLKAITEV LEALKENFDA 400
PQTRIFLEGE FQKLAQCIEV FGIHIFSLDI RQHSAIHEEA IEEILRLNGH 450
PEISYALLDE KEKVGLLNKL LEGPLPSLHS LYNRASDKLK EVLGPILVFS 500
RSIAILGKEV CGCYLISMTS GLSDILEVLY LCKICRCSID IAPLFETLSD 550
LKSSPQTLQD LLSHPLYRKY LQERSDKQIV MLGYSDSNKD CGYMTSNWWL 600
FQIQEKLHEV CRVHGVSLVL FHGRGGTIAR GGGPAAKAIL AQPKGLLEGK 650
IRITEQGEVL STRYHDFDIA FRILEQTTYG VLLAIHKSRK KTILPKSWEK 700
TIECIAEESY RAYTHLLHQE PDFLRFWQEV TPINEIGSLK IASRPIFRFR 750
LNNFEDLRAI PWVFSWMQTR FVIPGWYGIG SSLKKVIETS PKALSILQKM 800
YEKWTFFQTV IDNAQLSLAK TDIDIARLYC DLASDKNLAQ RIFSIIEAEY 850
KKTVETILKI TLQNNILDHE PILQRSIQLR NPYVDPLNYI QVEMIKRNRA 900
GQPPTALEID KIKSVIELTI NGISAGLRNT G 931
Length:931
Mass (Da):107,056
Last modified:February 5, 2008 - v1
Checksum:i7AA27B536340B1FD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU223848 Genomic DNA. Translation: ABX56590.1.
CP000975 Genomic DNA. Translation: ACD83793.1.
RefSeqiYP_001940391.1. NC_010794.1.

Genome annotation databases

EnsemblBacteriaiACD83793; ACD83793; Minf_1739.
GeneIDi6352685.
KEGGimin:Minf_1739.
PATRICi22492655. VBIMetInf111569_1803.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
EU223848 Genomic DNA. Translation: ABX56590.1 .
CP000975 Genomic DNA. Translation: ACD83793.1 .
RefSeqi YP_001940391.1. NC_010794.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 481448.Minf_1739.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACD83793 ; ACD83793 ; Minf_1739 .
GeneIDi 6352685.
KEGGi min:Minf_1739.
PATRICi 22492655. VBIMetInf111569_1803.

Phylogenomic databases

eggNOGi COG2352.
HOGENOMi HOG000238647.
KOi K01595.
OMAi FADGRMD.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci MINF481448:GJEI-1776-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: V4Imported.
  2. "Complete genome sequence of the extremely acidophilic methanotroph isolate V4, Methylacidiphilum infernorum, a representative of the bacterial phylum Verrucomicrobia."
    Hou S., Makarova K.S., Saw J.H., Senin P., Ly B.V., Zhou Z., Ren Y., Wang J., Galperin M.Y., Omelchenko M.V., Wolf Y.I., Yutin N., Koonin E.V., Stott M.B., Mountain B.W., Crowe M.A., Smirnova A.V., Dunfield P.F.
    , Feng L., Wang L., Alam M.
    Biol. Direct 3:26-26(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Isolate V4 and V4Imported.

Entry informationi

Entry nameiA9QPD2_METI4
AccessioniPrimary (citable) accession number: A9QPD2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: July 9, 2014
This is version 51 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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