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Protein
Submitted name:

Gag protein

Gene

gag

Organism
Human immunodeficiency virus 1
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Gag proteinImported
Gene namesi
Name:gagImported
OrganismiHuman immunodeficiency virus 1Imported
Taxonomic identifieri11676 [NCBI]
Taxonomic lineageiVirusesRetro-transcribing virusesRetroviridaeOrthoretrovirinaeLentivirusPrimate lentivirus group
Virus hostiHomo sapiens (Human) [TaxID: 9606]

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2PWOX-ray1.45A/B/C/D33-178[»]
4B4NX-ray1.81A33-178[»]
4INBX-ray1.80A33-178[»]
5HGKX-ray1.76A/B33-178[»]
SMRiA9PKC6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di1.10.1200.30. 1 hit.
1.10.375.10. 2 hits.
InterProiView protein in InterPro
IPR000721. Gag_p24.
IPR008916. Retrov_capsid_C.
IPR008919. Retrov_capsid_N.
PfamiView protein in Pfam
PF00607. Gag_p24. 1 hit.
SUPFAMiSSF47353. SSF47353. 1 hit.
SSF47943. SSF47943. 1 hit.

Sequencei

Sequence statusi: Fragment.

A9PKC6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
ALDKIEEEQN KSKKKAQQAA DAGNSSQVSQ NYPIVQNLQG QMVHQAISPR
60 70 80 90 100
TLNAWVKVVE EKAFSPEVIP MFSALSEGAT PQDLNTMLNT VGGHQAAMQM
110 120 130 140 150
LKETINEEAA EWDRLHPVHA GPIAPGQMRE PRGSDIAGTT STLQEQIGWM
160 170 180 190 200
THNPPIPVGE IYKRWIILGL NKIVRMYSPS SILDIRQGPK EPFRDYVDRF
210 220 230 240 250
YKTLRAEQAS QEVKNWMTET LLVQNANPDC KTILKALGPA ATLEEMMTAC
260 270
QGVGGPGHKA RVLAEAMSQV TNSANI
Length:276
Mass (Da):30,411
Last modified:February 5, 2008 - v1
Checksum:i218A040C26CA6338
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei276Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF150408 Genomic RNA. Translation: ABO61558.1.

Similar proteinsi

Entry informationi

Entry nameiA9PKC6_9HIV1
AccessioniPrimary (citable) accession number: A9PKC6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: August 30, 2017
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources