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Protein
Submitted name:

Putative uncharacterized protein

Gene
N/A
Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

Subcellular locationi

GO - Cellular componenti

  1. membrane Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi3694.eugene3.00010166.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG308011.
InParanoidiA9PI15.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9PI15-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MWAASCLASC CAACACSACT TVVSGISRRS ARIAYCGLFA LSLIVSWILR
60 70 80 90 100
EVAAPLMEQI PWINHFHKTP DREWFETDAV LRVSLGNFLF FTILAIMMVG
110 120 130 140 150
VKNQKDPRDS LHHGGWMAKV VCWCLLVIFM FFLPNEIVSF YESISKFGSG
160 170 180 190 200
LFLLVQVVLL LDFVHGWNDK WVGYDEQFWY AALFAVSFVC YVGTFAFSGL
210 220 230 240 250
LFHWFTASGQ DCGLNTFFIV MTLIFAFVFA IAALHPAVNG SVLPASVISL
260 270 280 290 300
YCMYLCYSGL SSEPREYECN GLHRHSKAVS TSTLTIGLLT TVLSVVYSAV
310 320 330 340 350
RAGSSTTLLS PPSSPRAGAD KPLLPLDNKP SEKEEKEKAK PVTYSYSFFH
360 370 380 390 400
IIFSLASMYS AMLLTGWSTS VGESGKLVDV GWPSVWVRIL TGWATAGLYI
410
WSLVAPILFP DREF
Length:414
Mass (Da):45,870
Last modified:February 5, 2008 - v1
Checksum:i96691C4C7E80B187
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF148026 mRNA. Translation: ABK96018.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF148026 mRNA. Translation: ABK96018.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.eugene3.00010166.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiNOG308011.
InParanoidiA9PI15.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PANTHERiPTHR10383. PTHR10383. 1 hit.
PfamiPF03348. Serinc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding."
    Ralph S.G., Chun H.J., Cooper D., Kirkpatrick R., Kolosova N., Gunter L., Tuskan G.A., Douglas C.J., Holt R.A., Jones S.J., Marra M.A., Bohlmann J.
    BMC Genomics 9:57-57(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Young and mature leavesImported.

Entry informationi

Entry nameiA9PI15_POPTR
AccessioniPrimary (citable) accession number: A9PI15
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 29, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.