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A9PFS6 (A9PFS6_POPTR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length182 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity. RuleBase RU003627 SAAS SAAS024681

Catalytic activity

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O. RuleBase RU003627 SAAS SAAS024681

3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2. RuleBase RU003627 SAAS SAAS024681

Subunit structure

8 large chains + 8 small chains By similarity. RuleBase RU003627 SAAS SAAS024681

Sequence similarities

Belongs to the RuBisCO small chain family. RuleBase RU003627

Sequences

Sequence LengthMass (Da)Tools
A9PFS6 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: D94DBE99714E0F51

FASTA18220,379
        10         20         30         40         50         60 
MASSSMISSA AVATVNRTPV QANMVAPFNG LKSAAAFPVS TRKANDITSI ASNGGRVQCM 

        70         80         90        100        110        120 
QVWPPTGLKK FETLSYLPDL TEEELAKEID YLLRSKWVPC LEFELEKGWV YREHHSSPGY 

       130        140        150        160        170        180 
YDGRYWTMWK LPMFGCTEAS QVLLELEEAK KAYPNAFIRI IGFDNTRQVQ CISFIAAKPK 


GV 

« Hide

References

[1]"Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding."
Ralph S.G., Chun H.J., Cooper D., Kirkpatrick R., Kolosova N., Gunter L., Tuskan G.A., Douglas C.J., Holt R.A., Jones S.J., Marra M.A., Bohlmann J.
BMC Genomics 9:57-57(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Young and mature leaves EMBL ABK95229.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EF147202 mRNA. Translation: ABK95229.1.
EF147224 mRNA. Translation: ABK95250.1.

3D structure databases

ProteinModelPortalA9PFS6.
SMRA9PFS6. Positions 60-181.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3694.gw1.IV.3246.1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

KEGGpop:POPTR_813777.

Phylogenomic databases

eggNOGCOG4451.
HOGENOMHOG000141332.
KOK01602.
ProtClustDBPLN02289.

Family and domain databases

Gene3D3.30.190.10. 1 hit.
InterProIPR024681. RuBisCO_sc.
IPR000894. RuBisCO_sc_dom.
IPR024680. RuBisCO_ssu_N.
[Graphical view]
PfamPF12338. RbcS. 1 hit.
PF00101. RuBisCO_small. 1 hit.
[Graphical view]
PRINTSPR00152. RUBISCOSMALL.
SUPFAMSSF55239. SSF55239. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9PFS6_POPTR
AccessionPrimary (citable) accession number: A9PFS6
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 16, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)