A9PCR7 (A9PCR7_POPTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Predicted protein EMBL EEF03205.1

Gene names

ORF Names:

POPTRDRAFT_578921 EMBL EEF03205.1

Organism

Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa) [Complete proteome] EMBL ABK94170.1

Taxonomic identifier

3694 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Malpighiales › Salicaceae › Saliceae › Populus

Protein attributes

Sequence length	363 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein N-linked glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9PCR7 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 36812F4F8D843CDA	FASTA	363	42,540
	10 20 30 40 50 60 MAPRLLRLAY RRVTFKVVFF ILLILVPICV IGILTHAQHV SYFLRPLWDN PPPPFKHLPH 70 80 90 100 110 120 YYAENVSMEH LCHLHGWSLR SEPRRVFDAI IFSNELDVLE IRWHELYPYI TKFVILESNT 130 140 150 160 170 180 TFTGIPKPLF FDSNRSRFAF AKEKIVHGVF SGRIAARGKN EDPFVLEFEQ RKAMSGLLRS 190 200 210 220 230 240 SGISYGDLII MSDADEIPSP HTLKLLQWCD EIPHAMHLEL KHYMYSFEFP VDYSSWRATI 250 260 270 280 290 300 QIFGPRTGYR HSRQTDLILS DSGWHCSFCF RRLQEFVFKM TAYSHADRVR RNEFLNYSRI 310 320 330 340 350 360 QKIICSGDDL FDMLPEEHTF QELIKKMGPI PHSASAVHLP SYLIENADKF RFLLPGNCLR TLE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding." Ralph S.G., Chun H.J., Cooper D., Kirkpatrick R., Kolosova N., Gunter L., Tuskan G.A., Douglas C.J., Holt R.A., Jones S.J., Marra M.A., Bohlmann J. BMC Genomics 9:57-57(2008) [PubMed: 18230180] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Phloem and cambium EMBL ABK94170.1.
[2]	"The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)." Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I., Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J., Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W., Brun A. , Brunner A., Busov V., Campbell M., Carlson J., Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M., Couturier J., Covert S., Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F., Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S., Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S. Science 313:1596-1604(2006) [PubMed: 16973872] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nisqually.
[3]	US DOE Joint Genome Institute (JGI-PGF) Grigoriev I.V., Terry A., Salamov A.A., Otillar R., Lou Y., Lucas S., Hammon N., Glavina del Rio T., Detter J., Kalin E., Tice H., Pitluck S., Chapman J., Putnam N.H., Brunner A., Busov V., Campbell M., Chalot M. , Covert S., Davis J., DiFazio S., Gribskov M., Gunter L., Hamberger B., Jansson S., Joshi C., Larimer F., Martin F., Napoli C., Nelson D., Ralph S., Rombauts S., Rouze P., Schrader J., Tsai C., Vahala J., Tuskan G., Rokhsar D. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	EF146066 mRNA. Translation: ABK94170.1. CM000354 Genomic DNA. Translation: EEF03205.1.
RefSeq	XP_002324640.1. XM_002324604.1.
UniGene	Pth.3135.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	GT17. Glycosyltransferase Family 17.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	POPTR_0018s12800.1; POPTR_0018s12800.1; POPTR_0018s12800.
GeneID	7459880.
KEGG	pop:POPTR_578921.
Phylogenomic databases
GeneTree	EPGT00050000017473.
OMA	KFVILES.
PhylomeDB	A9PCR7.
ProtClustDB	CLSN2682029.
Family and domain databases
InterPro	IPR006813. Glyco_trans_17. [Graphical view]
KO	K00737.
PANTHER	PTHR12224. Glyco_trans_17. 1 hit.
Pfam	PF04724. Glyco_transf_17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9PCR7_POPTR

Accession

Primary (citable) accession number: A9PCR7

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)