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A9NG16

- DEOB_ACHLI

UniProt

A9NG16 - DEOB_ACHLI

Protein

Phosphopentomutase

Gene

deoB

Organism
Acholeplasma laidlawii (strain PG-8A)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 50 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    Phosphotransfer between the C1 and C5 carbon atoms of pentose.UniRule annotation

    Catalytic activityi

    Alpha-D-ribose 1-phosphate = D-ribose 5-phosphate.UniRule annotation
    2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-alpha-D-ribose 5-phosphate.UniRule annotation

    Cofactori

    Binds 1 or 2 manganese ions.UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi12 – 121ManganeseUniRule annotation
    Metal bindingi296 – 2961ManganeseUniRule annotation
    Metal bindingi332 – 3321ManganeseUniRule annotation
    Metal bindingi333 – 3331ManganeseUniRule annotation
    Metal bindingi344 – 3441ManganeseUniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. manganese ion binding Source: UniProtKB-HAMAP
    3. phosphopentomutase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. 5-phosphoribose 1-diphosphate biosynthetic process Source: UniProtKB-UniPathway
    2. cellular metabolic compound salvage Source: InterPro
    3. deoxyribonucleotide catabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Isomerase

    Keywords - Ligandi

    Manganese, Metal-binding

    Enzyme and pathway databases

    BioCyciALAI441768:GI40-680-MONOMER.
    UniPathwayiUPA00087; UER00173.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    PhosphopentomutaseUniRule annotation (EC:5.4.2.7UniRule annotation)
    Alternative name(s):
    PhosphodeoxyribomutaseUniRule annotation
    Gene namesi
    Name:deoBUniRule annotation
    Ordered Locus Names:ACL_0680
    OrganismiAcholeplasma laidlawii (strain PG-8A)
    Taxonomic identifieri441768 [NCBI]
    Taxonomic lineageiBacteriaTenericutesMollicutesAcholeplasmatalesAcholeplasmataceaeAcholeplasma
    ProteomesiUP000008558: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 397397PhosphopentomutasePRO_1000133054Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi441768.ACL_0680.

    Structurei

    3D structure databases

    ProteinModelPortaliA9NG16.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the phosphopentomutase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1015.
    HOGENOMiHOG000008159.
    KOiK01839.
    OMAiEHTREHI.
    OrthoDBiEOG6R5C7J.

    Family and domain databases

    Gene3Di3.30.70.1250. 1 hit.
    3.40.720.10. 2 hits.
    HAMAPiMF_00740. Phosphopentomut.
    InterProiIPR017849. Alkaline_Pase-like_a/b/a.
    IPR017850. Alkaline_phosphatase_core.
    IPR010045. DeoB.
    IPR006124. Metalloenzyme.
    IPR024052. Phosphopentomutase_DeoB_cap.
    [Graphical view]
    PfamiPF01676. Metalloenzyme. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001491. Ppentomutase. 1 hit.
    SUPFAMiSSF143856. SSF143856. 1 hit.
    SSF53649. SSF53649. 2 hits.
    TIGRFAMsiTIGR01696. deoB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    A9NG16-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRFKRVFLIV MDSLGVGASE DANQYFNEGV DDTKANTFGH IAESMDLRIP    50
    NLEKLGVGNI IPIKGTKSVE LSSSYVTKIR EKSLGKDTMT GHWEIMGLYV 100
    TTPFQTFTDT GFPKELLDEL EERTGRKIIG NIAASGTEIL KDLGEEHMRT 150
    GDLIVYTSAD SVLQIAMHEE IIPIEEQYRI SAIARDITMR PDWKVGRVIT 200
    RPFLGTNKDN FKRTSNRKDY ALKPSEETTL NFLSDANYDV IALGKINDIF 250
    DGYGINKYSK TVSNDDGMKQ ITEWAKKDFT GLCFLNLVDF DALYGHRRDP 300
    HGYGKAIMDM DSQLPELMAN LNEDDLLILT ADHGNDPTYV GTDHTREFVP 350
    MIAYSKSFKS GGSLPILNTF ADLGSTISDN FKVKKTEHGD SFLSKLK 397
    Length:397
    Mass (Da):44,505
    Last modified:February 5, 2008 - v1
    Checksum:i58CE487E95F8CB5C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000896 Genomic DNA. Translation: ABX81296.1.
    RefSeqiWP_012242627.1. NC_010163.1.
    YP_001620672.1. NC_010163.1.

    Genome annotation databases

    EnsemblBacteriaiABX81296; ABX81296; ACL_0680.
    GeneIDi5803244.
    KEGGiacl:ACL_0680.
    PATRICi20638080. VBIAchLai134690_0660.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000896 Genomic DNA. Translation: ABX81296.1 .
    RefSeqi WP_012242627.1. NC_010163.1.
    YP_001620672.1. NC_010163.1.

    3D structure databases

    ProteinModelPortali A9NG16.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 441768.ACL_0680.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABX81296 ; ABX81296 ; ACL_0680 .
    GeneIDi 5803244.
    KEGGi acl:ACL_0680.
    PATRICi 20638080. VBIAchLai134690_0660.

    Phylogenomic databases

    eggNOGi COG1015.
    HOGENOMi HOG000008159.
    KOi K01839.
    OMAi EHTREHI.
    OrthoDBi EOG6R5C7J.

    Enzyme and pathway databases

    UniPathwayi UPA00087 ; UER00173 .
    BioCyci ALAI441768:GI40-680-MONOMER.

    Family and domain databases

    Gene3Di 3.30.70.1250. 1 hit.
    3.40.720.10. 2 hits.
    HAMAPi MF_00740. Phosphopentomut.
    InterProi IPR017849. Alkaline_Pase-like_a/b/a.
    IPR017850. Alkaline_phosphatase_core.
    IPR010045. DeoB.
    IPR006124. Metalloenzyme.
    IPR024052. Phosphopentomutase_DeoB_cap.
    [Graphical view ]
    Pfami PF01676. Metalloenzyme. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001491. Ppentomutase. 1 hit.
    SUPFAMi SSF143856. SSF143856. 1 hit.
    SSF53649. SSF53649. 2 hits.
    TIGRFAMsi TIGR01696. deoB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PG-8A.

    Entry informationi

    Entry nameiDEOB_ACHLI
    AccessioniPrimary (citable) accession number: A9NG16
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: April 14, 2009
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 50 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3