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A9NBB8 (A9NBB8_COXBR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ligD EMBL ABX77261.1
Ordered Locus Names:COXBURSA331_A2135 EMBL ABX77261.1
OrganismCoxiella burnetii (strain RSA 331 / Henzerling II) [Complete proteome] [HAMAP] EMBL ABX77261.1
Taxonomic identifier360115 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaLegionellalesCoxiellaceaeCoxiella

Protein attributes

Sequence length815 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A9NBB8 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 6306CB1B740E1282

FASTA81593,698
        10         20         30         40         50         60 
MILLSLKHYR QKRDFTKTSE PQGESASSSQ QFIYVIQKHD ASHLHYDLRL ELDGVLKSWA 

        70         80         90        100        110        120 
VPKGPSLNSD LKRLAVEVED HPIDYATFEG NIPKGQYGAG PVIVWDKGTW QPEGNAKENL 

       130        140        150        160        170        180 
KKGKLVFIIN GEKLKGKWAL VRLKTDDYKN NWLLIKKKDH YATERFDIDN YPLSVISGAS 

       190        200        210        220        230        240 
IEEIKNHKLA LSLSDLKNAK KTVVPEFIQP QLAKLKTVVP DSPDWIHEIK FDGYRIICII 

       250        260        270        280        290        300 
KKGIIQLMTR NQKNWTEKLA GLAETMKSIP IDESILDGEI VVFDESGKTD FQLLQNAIKA 

       310        320        330        340        350        360 
KKYNEIKYYL FDIPFCQKFD LSQVPLIMRK RLLKKLILQW KEKSGSILYS SHIKGNGKAI 

       370        380        390        400        410        420 
LERACELGLE GIISKKIDAA YEQRRSSSWI KLKCKRQQEF VIGGYTKPRG EQLYFGALLL 

       430        440        450        460        470        480 
GYYQNKKLIY CGRVGTGFSS LSLKDIYEKL INREQKAPAF SELPTFGIKA GNHWVKPELV 

       490        500        510        520        530        540 
AEIEFAEWTK DKRLRQPVFK GLREDKEAKG VKLETVKKTT VKNKPNNIKL TNPEKILYPE 

       550        560        570        580        590        600 
EKITKRQLAD FYSKIADRLL PHIVHRPLML LRCSNGYNKE CFFQKHPDQN GEEFVYSVEI 

       610        620        630        640        650        660 
EEKERKRYLT IHDEKGLLAL VQMGVLEIHP WGSSDSHPEK PDRLIFDIDP HPAVSWKAVI 

       670        680        690        700        710        720 
NCATDVFEVL KALGLRSFVK TSGGKGLHVY VPIQPQLGWE KLHEFAQKLA KLIVQVNPRL 

       730        740        750        760        770        780 
YTAELSKGKR LNKIFIDYIR NNRGATCVAP YSTRAKKHVP LSTPVSWDEL SAVKSPTQFT 

       790        800        810 
IKNIFHRLEA LNQDPWEEFF DIKQSITASM WKFFS 

« Hide

References

[1]"Genome sequencing of phylogenetically and phenotypically diverse Coxiella burnetii isolates."
Seshadri R., Samuel J.E.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RSA 331 / Henzerling II.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000890 Genomic DNA. Translation: ABX77261.1.
RefSeqYP_001597749.1. NC_010117.1.

3D structure databases

ProteinModelPortalA9NBB8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING360115.COXBURSA331_A2135.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX77261; ABX77261; COXBURSA331_A2135.
GeneID5793783.
KEGGcbs:COXBURSA331_A2135.
PATRIC17928504. VBICoxBur33747_2109.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBCLSK915136.

Enzyme and pathway databases

BioCycCBUR360115:GI0X-2141-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9NBB8_COXBR
AccessionPrimary (citable) accession number: A9NBB8
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 16, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)