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Protein

HTH-type transcriptional regulator ArgP

Gene

argP

Organism
Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Controls the transcription of genes involved in arginine and lysine metabolism.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi21 – 4020H-T-H motifUniRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciSENT882884:GJ8H-4578-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator ArgPUniRule annotation
Gene namesi
Name:argPUniRule annotation
Synonyms:iciA
Ordered Locus Names:SARI_04586
OrganismiSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Taxonomic identifieri41514 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella
Proteomesi
  • UP000002084 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 297297HTH-type transcriptional regulator ArgPPRO_1000081591Add
BLAST

Interactioni

Subunit structurei

Homodimer.UniRule annotation

Protein-protein interaction databases

STRINGi882884.SARI_04586.

Structurei

3D structure databases

ProteinModelPortaliA9MRG1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini4 – 6057HTH lysR-typeUniRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH lysR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CXD. Bacteria.
COG0583. LUCA.
HOGENOMiHOG000219802.
KOiK05596.
OMAiSTCCMIP.
OrthoDBiPOG091H09MH.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
HAMAPiMF_00513. HTH_type_ArgP. 1 hit.
InterProiIPR017685. ArgP.
IPR023490. ArgP_Gammaproteobact.
IPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
TIGRFAMsiTIGR03298. argP. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9MRG1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRPDYRTLQ ALDAVIRERG FERAAQKLCI TQSAVSQRIK QLENMFGQPL
60 70 80 90 100
LVRTVPPRPT EQGQKLLALL RQVELLEEEW LGDEQTGSTP LLLSLAVNAD
110 120 130 140 150
SLATWLLPAL APVLADSPIR LNLQVEDETR TQERLRRGEV VGAVSIQHQA
160 170 180 190 200
LPSCLVDKLG ALDYLFVASK PFAERYFPNG VTRSSLLKAP AVAFDHLDDM
210 220 230 240 250
HQAFLQQNFD LPPGSVPCHI VNSSEAFVQL ARQGTTCCMI PHLQIEQELE
260 270 280 290
SGELINLTPG LLQRRMLYWH RFAPESRMMR KVTDALLEYG HKVLRQD
Length:297
Mass (Da):33,509
Last modified:February 5, 2008 - v1
Checksum:iC5E1D158605FF625
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000880 Genomic DNA. Translation: ABX24359.1.
RefSeqiWP_000828346.1. NC_010067.1.

Genome annotation databases

EnsemblBacteriaiABX24359; ABX24359; SARI_04586.
KEGGises:SARI_04586.
PATRICi18478104. VBISalEnt13497_4351.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000880 Genomic DNA. Translation: ABX24359.1.
RefSeqiWP_000828346.1. NC_010067.1.

3D structure databases

ProteinModelPortaliA9MRG1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi882884.SARI_04586.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX24359; ABX24359; SARI_04586.
KEGGises:SARI_04586.
PATRICi18478104. VBISalEnt13497_4351.

Phylogenomic databases

eggNOGiENOG4105CXD. Bacteria.
COG0583. LUCA.
HOGENOMiHOG000219802.
KOiK05596.
OMAiSTCCMIP.
OrthoDBiPOG091H09MH.

Enzyme and pathway databases

BioCyciSENT882884:GJ8H-4578-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
HAMAPiMF_00513. HTH_type_ArgP. 1 hit.
InterProiIPR017685. ArgP.
IPR023490. ArgP_Gammaproteobact.
IPR005119. LysR_subst-bd.
IPR000847. Tscrpt_reg_HTH_LysR.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00126. HTH_1. 1 hit.
PF03466. LysR_substrate. 1 hit.
[Graphical view]
PRINTSiPR00039. HTHLYSR.
SUPFAMiSSF46785. SSF46785. 1 hit.
TIGRFAMsiTIGR03298. argP. 1 hit.
PROSITEiPS50931. HTH_LYSR. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiARGP_SALAR
AccessioniPrimary (citable) accession number: A9MRG1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 5, 2008
Last modified: September 7, 2016
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.