Skip Header

Contribute Send feedback
Read comments (?) or add your own

A9MJF5 (A9MJF5_SALAR) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:SARI_02141
OrganismSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) [Complete proteome] [HAMAP]
Taxonomic identifier41514 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella

Protein attributes

Sequence length427 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pectinesterase family. RuleBase RU004180

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcell wall modification

Inferred from electronic annotation. Source: InterPro

   Cellular componentcell wall

Inferred from electronic annotation. Source: InterPro

   Molecular functionpectinesterase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A9MJF5 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: A40BABE5DDB10C9F

FASTA42745,834
        10         20         30         40         50         60 
MNTLSVSRLA LALAFGVTLS ACSSTPPDQI PSDQTAPGTA SRPILSANEA KNFVAAHYFA 

        70         80         90        100        110        120 
SLTPNTAPWS PSPITLPAQP DFVVGPAGTP GVTHTSIQAA VDAAMVKRTN KRQYIAIMPG 

       130        140        150        160        170        180 
AYQGTVYIPA APGSLTLYGT GEKPIDVKIG MAIDGEMSIA DWRRAVNPGG KYMPGKPAWY 

       190        200        210        220        230        240 
MFDNCQSKRA ATIGVMCSAA FWSQNNGLQL QNLTIENTLG DSVDAGNHPA VALRTDGDKV 

       250        260        270        280        290        300 
QINKVNILGR QNTFFVTNSG VQNRLQTDRQ PRTLVTNSYI EGDVDMVSGR GAVVFDNTNF 

       310        320        330        340        350        360 
QVVNSRTQQE AYVFAPATLS NIYYGFLAIN SRFSASGDGV AQLGRSLDVD ANTNGQVVIR 

       370        380        390        400        410        420 
DSVINEGFNI AKPWADAVIS KRPFAGNTGT VDDKGEVQRN LNDTNYNRMW EYNNRGPGSK 


VVTEPKQ 

« Hide

References

[1]McClelland M., Sanderson E.K., Porwollik S., Spieth J., Clifton W.S., Fulton R., Chunyan W., Wollam A., Shah N., Pepin K., Bhonagiri V., Nash W., Johnson M., Thiruvilangam P., Wilson R.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-731 / CDC346-86 / RSK2980.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000880 Genomic DNA. Translation: ABX22018.1.
RefSeqYP_001571160.1. NC_010067.1.

3D structure databases

ProteinModelPortalA9MJF5.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9MJF5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5762563.
GenomeReviewsGene locus SARI_02141 in contig CP000880_GR.
KEGGses:SARI_02141.
PATRIC18473388. VBISalEnt13497_2063.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG416454.
OMAFLATNSR.
ProtClustDBPRK10531.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
IPR000070. Pectinesterase_cat.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
KOK01051.
PfamPF01095. Pectinesterase. 1 hit.
[Graphical view]
SUPFAMSSF51126. Pectin_lyas_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9MJF5_SALAR
AccessionPrimary (citable) accession number: A9MJF5
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)