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Reviewed, UniProtKB/Swiss-Prot A9MH27 (GHRA_SALAR)

Last modified January 19, 2010. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Glyoxylate/hydroxypyruvate reductase A
    EC=1.1.1.79
    EC=1.1.1.81
Alternative name(s):
    2-ketoacid reductase
Gene names
Name: ghrA
Ordered Locus Names: SARI_01863
OrganismSalmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) [Complete proteome] [HAMAP]
Taxonomic identifier41514 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSalmonella

Protein attributes

Sequence length312 AA.
Sequence statusComplete.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively By similarity. HAMAP MF_01666

Catalytic activity

Glycolate + NADP+ = glyoxylate + NADPH. HAMAP MF_01666

D-glycerate + NAD(P)+ = hydroxypyruvate + NAD(P)H. HAMAP MF_01666

Subcellular location

Cytoplasm Probable HAMAP MF_01666.

Sequence similarities

Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrA subfamily.

Ontologies

Keywords
   Cellular componentCytoplasm
   LigandNAD
NADP
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processoxidation reduction

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

plasma membrane

Inferred from electronic annotation. Source: HAMAP

   Molecular functioncofactor binding

Inferred from electronic annotation. Source: InterPro

glyoxylate reductase (NADP) activity

Inferred from electronic annotation. Source: HAMAP

hydroxypyruvate reductase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 312312Glyoxylate/hydroxypyruvate reductase A HAMAP MF_01666
PRO_0000348367

Sites

Active site2271 By similarity
Active site2751Proton donor By similarity

Sequences

Sequence LengthMass (Da)Tools
A9MH27-1 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: D960AB6E2EBAF63C

FASTA31235,130
        10         20         30         40         50         60 
MEIIFYHPTF NAAWWVNALE KALPHVRVRE WKAGDNSPAD YALVWQPPVE MLAGRRLKAV 

        70         80         90        100        110        120 
FALGAGVDSI LSELNTHPEM LDASIPLFRL EDTGMGLQMQ EYAVSQVLHW FRRFDDYQAL 

       130        140        150        160        170        180 
KNQAIWKPLP EYTREEFSVG IMGAGILGSK VAESLQAWGF PLRCWSRSRK SWPGVESYAG 

       190        200        210        220        230        240 
REELDAFLNQ TRVLINLLPN TAQTVGIINR ELLNKLPDSA YVLNLARGVH VNEADLLAAL 

       250        260        270        280        290        300 
ESGKLKGAML DVFSQEPLPQ ESPLWRHSRV AMTPHIAAVT RPAEAIEYIS RTINQLERGE 

       310 
PVTGQVDRAR GY 

« Hide

References

[1]McClelland M., Sanderson E.K., Porwollik S., Spieth J., Clifton W.S., Fulton R., Chunyan W., Wollam A., Shah N., Pepin K., Bhonagiri V., Nash W., Johnson M., Thiruvilangam P., Wilson R.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000880 Genomic DNA. Translation: ABX21747.1.
RefSeqYP_001570888.1.

3D structure databases

SMRA9MH27. Positions 1-283.
ModBaseSearch...

Genome annotation databases

GeneID5761154.
GenomeReviewsGene locus SARI_01863 in contig CP000880_GR.
KEGGses:SARI_01863.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG731446.
OMAYALVWRA.

Family and domain databases

HAMAPMF_01666. 2-Hacid_dh_C_GhrA.
[Tree]
InterProIPR006140. D-isomer_2_OHA_DH_NAD-bd.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
Gene3DG3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PfamPF02826. 2-Hacid_dh_C. 1 hit.
[Graphical view]
PROSITEPS00065. D_2_HYDROXYACID_DH_1. False negative.
PS00670. D_2_HYDROXYACID_DH_2. False negative.
PS00671. D_2_HYDROXYACID_DH_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameGHRA_SALAR
AccessionPrimary (citable) accession number: A9MH27
Entry history
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: February 5, 2008
Last modified: January 19, 2010
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents