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Protein

RNA polymerase sigma-54 factor

Gene

rpoN

Organism
Brucella canis (strain ATCC 23365 / NCTC 10854)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingUniRule annotation, NucleotidyltransferaseUniRule annotation, Sigma factorUniRule annotation, Transferase
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciBCAN483179:G1GAF-163-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase sigma-54 factorUniRule annotation
Gene namesi
Name:rpoNImported
Ordered Locus Names:BCAN_A0163Imported
OrganismiBrucella canis (strain ATCC 23365 / NCTC 10854)Imported
Taxonomic identifieri483179 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
Proteomesi
  • UP000001385 Componenti: Chromosome I

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliA9M7A3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini132 – 318Sigma54_CBDInterPro annotationAdd BLAST187
Domaini332 – 491Sigma54_DBDInterPro annotationAdd BLAST160

Sequence similaritiesi

Belongs to the sigma-54 factor family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000071904
KOiK03092
OMAiVTTQKFM

Family and domain databases

Gene3Di1.10.10.1330, 1 hit
InterProiView protein in InterPro
IPR000394 RNA_pol_sigma_54
IPR007046 RNA_pol_sigma_54_core-bd
IPR007634 RNA_pol_sigma_54_DNA-bd
IPR038709 RpoN_core-bd_sf
PANTHERiPTHR32248 PTHR32248, 1 hit
PfamiView protein in Pfam
PF00309 Sigma54_AID, 1 hit
PF04963 Sigma54_CBD, 1 hit
PF04552 Sigma54_DBD, 1 hit
PIRSFiPIRSF000774 RpoN, 1 hit
PRINTSiPR00045 SIGMA54FCT
TIGRFAMsiTIGR02395 rpoN_sigma, 1 hit
PROSITEiView protein in PROSITE
PS00717 SIGMA54_1, 1 hit
PS00718 SIGMA54_2, 1 hit

Sequencei

Sequence statusi: Complete.

A9M7A3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALSPKLDIR QSQSLVMTPQ LMQSIKLLQM THIELDQFLD MEIEKNPLLD
60 70 80 90 100
RIEADSDDLA GGEPASGADD PTESADNDDW FQTEGAGAAE NLSATFDNSL
110 120 130 140 150
ENIFPDDLGS SQEQWKLSAG EGAFSGNGYD IDQVTAGRLS LSDYVAEQIV
160 170 180 190 200
LGFSKAADRF IATALADALD ESGYLRIDIV GLAHNLGIET AEIGRILGVL
210 220 230 240 250
QGFDPPGLFA RDLRECLAIQ LRLKDRFDPA MEALIANLDL LARRDFATLQ
260 270 280 290 300
KICGVDQADL IDMLAEIRAL DSKPGARFEV SVADTIVPDV LVFSARDGGW
310 320 330 340 350
AIELNPATMP RLIVNNEYYA EVSGSVKTEE KAFLTDCMQT AGWLVRSLDQ
360 370 380 390 400
RARTILKVAQ EIVRQQDGFL RHGVAHLKPL NLRMVADAVG MHESTISRVT
410 420 430 440 450
ANKFMATPRG VFELRYFFTA SLASSEGGEA HSSESVRHRI RQVIEAEKPD
460 470 480 490 500
EVLSDDAIVD ALKKDGVDIA RRTVAKYREA MNIASSVQRR REKKARFSTP
Length:500
Mass (Da):54,976
Last modified:February 5, 2008 - v1
Checksum:iEE924E11655E701E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000872 Genomic DNA Translation: ABX61262.1
RefSeqiWP_004691353.1, NC_010103.1

Genome annotation databases

EnsemblBacteriaiABX61262; ABX61262; BCAN_A0163
KEGGibcs:BCAN_A0163

Similar proteinsi

Entry informationi

Entry nameiA9M7A3_BRUC2
AccessioniPrimary (citable) accession number: A9M7A3
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 23, 2018
This is version 63 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
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Main funding by: National Institutes of Health