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A9M7A3

- A9M7A3_BRUC2

UniProt

A9M7A3 - A9M7A3_BRUC2

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Protein

RNA polymerase sigma-54 factor

Gene

rpoN

Organism
Brucella canis (strain ATCC 23365 / NCTC 10854)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.UniRule annotation

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. DNA-directed RNA polymerase activity Source: UniProtKB-KW
  3. sequence-specific DNA binding transcription factor activity Source: InterPro
  4. sigma factor activity Source: UniProtKB-KW

GO - Biological processi

  1. DNA-templated transcription, initiation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseUniRule annotation, Sigma factorUniRule annotation, Transferase

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-bindingUniRule annotation

Enzyme and pathway databases

BioCyciBCAN483179:GJ7I-162-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase sigma-54 factorUniRule annotation
Gene namesi
Name:rpoNImported
Ordered Locus Names:BCAN_A0163Imported
OrganismiBrucella canis (strain ATCC 23365 / NCTC 10854)Imported
Taxonomic identifieri483179 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000001385: Chromosome I

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi483179.BCAN_A0163.

Structurei

3D structure databases

ProteinModelPortaliA9M7A3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the sigma-54 factor family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1508.
HOGENOMiHOG000071904.
KOiK03092.
OMAiDDSEWGG.
OrthoDBiEOG60CWN7.

Family and domain databases

InterProiIPR000394. RNA_pol_sigma_54.
IPR007046. RNA_pol_sigma_54_core-bd.
IPR007634. RNA_pol_sigma_54_DNA-bd.
[Graphical view]
PfamiPF00309. Sigma54_AID. 1 hit.
PF04963. Sigma54_CBD. 1 hit.
PF04552. Sigma54_DBD. 1 hit.
[Graphical view]
PIRSFiPIRSF000774. RpoN. 1 hit.
PRINTSiPR00045. SIGMA54FCT.
TIGRFAMsiTIGR02395. rpoN_sigma. 1 hit.
PROSITEiPS00717. SIGMA54_1. 1 hit.
PS00718. SIGMA54_2. 1 hit.
PS50044. SIGMA54_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9M7A3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MALSPKLDIR QSQSLVMTPQ LMQSIKLLQM THIELDQFLD MEIEKNPLLD
60 70 80 90 100
RIEADSDDLA GGEPASGADD PTESADNDDW FQTEGAGAAE NLSATFDNSL
110 120 130 140 150
ENIFPDDLGS SQEQWKLSAG EGAFSGNGYD IDQVTAGRLS LSDYVAEQIV
160 170 180 190 200
LGFSKAADRF IATALADALD ESGYLRIDIV GLAHNLGIET AEIGRILGVL
210 220 230 240 250
QGFDPPGLFA RDLRECLAIQ LRLKDRFDPA MEALIANLDL LARRDFATLQ
260 270 280 290 300
KICGVDQADL IDMLAEIRAL DSKPGARFEV SVADTIVPDV LVFSARDGGW
310 320 330 340 350
AIELNPATMP RLIVNNEYYA EVSGSVKTEE KAFLTDCMQT AGWLVRSLDQ
360 370 380 390 400
RARTILKVAQ EIVRQQDGFL RHGVAHLKPL NLRMVADAVG MHESTISRVT
410 420 430 440 450
ANKFMATPRG VFELRYFFTA SLASSEGGEA HSSESVRHRI RQVIEAEKPD
460 470 480 490 500
EVLSDDAIVD ALKKDGVDIA RRTVAKYREA MNIASSVQRR REKKARFSTP
Length:500
Mass (Da):54,976
Last modified:February 5, 2008 - v1
Checksum:iEE924E11655E701E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000872 Genomic DNA. Translation: ABX61262.1.
RefSeqiYP_001592033.1. NC_010103.1.

Genome annotation databases

EnsemblBacteriaiABX61262; ABX61262; BCAN_A0163.
GeneIDi5784589.
KEGGibcs:BCAN_A0163.
PATRICi17828974. VBIBruCan25663_0165.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000872 Genomic DNA. Translation: ABX61262.1 .
RefSeqi YP_001592033.1. NC_010103.1.

3D structure databases

ProteinModelPortali A9M7A3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 483179.BCAN_A0163.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABX61262 ; ABX61262 ; BCAN_A0163 .
GeneIDi 5784589.
KEGGi bcs:BCAN_A0163.
PATRICi 17828974. VBIBruCan25663_0165.

Phylogenomic databases

eggNOGi COG1508.
HOGENOMi HOG000071904.
KOi K03092.
OMAi DDSEWGG.
OrthoDBi EOG60CWN7.

Enzyme and pathway databases

BioCyci BCAN483179:GJ7I-162-MONOMER.

Miscellaneous databases

PROi A9M7A3.

Family and domain databases

InterProi IPR000394. RNA_pol_sigma_54.
IPR007046. RNA_pol_sigma_54_core-bd.
IPR007634. RNA_pol_sigma_54_DNA-bd.
[Graphical view ]
Pfami PF00309. Sigma54_AID. 1 hit.
PF04963. Sigma54_CBD. 1 hit.
PF04552. Sigma54_DBD. 1 hit.
[Graphical view ]
PIRSFi PIRSF000774. RpoN. 1 hit.
PRINTSi PR00045. SIGMA54FCT.
TIGRFAMsi TIGR02395. rpoN_sigma. 1 hit.
PROSITEi PS00717. SIGMA54_1. 1 hit.
PS00718. SIGMA54_2. 1 hit.
PS50044. SIGMA54_3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23365 / NCTC 10854Imported.

Entry informationi

Entry nameiA9M7A3_BRUC2
AccessioniPrimary (citable) accession number: A9M7A3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: October 1, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3