A9M7A3 (A9M7A3_BRUC2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
RNA polymerase sigma-54 factor PIRNR PIRNR000774

Gene names

Name:	rpoN EMBL ABX61262.1
Ordered Locus Names:	BCAN_A0163

Organism

Brucella canis (strain ATCC 23365 / NCTC 10854) [Complete proteome] [HAMAP]

Taxonomic identifier

483179 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Brucellaceae › Brucella › Brucella canis

Protein attributes

Sequence length	500 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released By similarity. PIRNR PIRNR000774
Sequence similarities	Belongs to the sigma-54 factor family. PIRNR PIRNR000774

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Cellular component	DNA-directed RNA polymerase PIRNR PIRNR000774
Ligand	DNA-binding PIRNR PIRNR000774
Molecular function	Nucleotidyltransferase PIRNR PIRNR000774 Sigma factor PIRNR PIRNR000774 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, initiation Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro sigma factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9M7A3 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: EE924E11655E701E	FASTA	500	54,976
	10 20 30 40 50 60 MALSPKLDIR QSQSLVMTPQ LMQSIKLLQM THIELDQFLD MEIEKNPLLD RIEADSDDLA 70 80 90 100 110 120 GGEPASGADD PTESADNDDW FQTEGAGAAE NLSATFDNSL ENIFPDDLGS SQEQWKLSAG 130 140 150 160 170 180 EGAFSGNGYD IDQVTAGRLS LSDYVAEQIV LGFSKAADRF IATALADALD ESGYLRIDIV 190 200 210 220 230 240 GLAHNLGIET AEIGRILGVL QGFDPPGLFA RDLRECLAIQ LRLKDRFDPA MEALIANLDL 250 260 270 280 290 300 LARRDFATLQ KICGVDQADL IDMLAEIRAL DSKPGARFEV SVADTIVPDV LVFSARDGGW 310 320 330 340 350 360 AIELNPATMP RLIVNNEYYA EVSGSVKTEE KAFLTDCMQT AGWLVRSLDQ RARTILKVAQ 370 380 390 400 410 420 EIVRQQDGFL RHGVAHLKPL NLRMVADAVG MHESTISRVT ANKFMATPRG VFELRYFFTA 430 440 450 460 470 480 SLASSEGGEA HSSESVRHRI RQVIEAEKPD EVLSDDAIVD ALKKDGVDIA RRTVAKYREA 490 500 MNIASSVQRR REKKARFSTP

References

[1]

"Brucella canis ATCC 23365 whole genome shotgun sequencing project." Setubal J.C., Bowns C., Boyle S., Crasta O.R., Czar M.J., Dharmanolla C., Gillespie J.J., Kenyon R.W., Lu J., Mane S., Mohapatra S., Nagrani S., Purkayastha A., Rajasimha H.K., Shallom J.M., Shallom S., Shukla M., Snyder E.E. , Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., Bruce D., Detter C., Munk C., Brettin T.S. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 23365 / NCTC 10854.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000872 Genomic DNA. Translation: ABX61262.1.
RefSeq	YP_001592033.1. NC_010103.1.
3D structure databases
ProteinModelPortal	A9M7A3.
ModBase	Search...
Protein-protein interaction databases
STRING	483179.BCAN_A0163.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABX61262; ABX61262; BCAN_A0163.
GeneID	5784589.
KEGG	bcs:BCAN_A0163.
PATRIC	17828974. VBIBruCan25663_0165.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1508.
HOGENOM	HOG000071904.
KO	K03092.
OMA	RFDPAMQ.
ProtClustDB	PRK05932.
Enzyme and pathway databases
BioCyc	BCAN483179:GJ7I-162-MONOMER.
Family and domain databases
InterPro	IPR000394. RNA_pol_sigma_54. IPR007046. RNA_pol_sigma_54_core-bd. IPR007634. RNA_pol_sigma_54_DNA-bd. [Graphical view]
Pfam	PF00309. Sigma54_AID. 1 hit. PF04963. Sigma54_CBD. 1 hit. PF04552. Sigma54_DBD. 1 hit. [Graphical view]
PIRSF	PIRSF000774. RpoN. 1 hit.
PRINTS	PR00045. SIGMA54FCT.
TIGRFAMs	TIGR02395. rpoN_sigma. 1 hit.
PROSITE	PS00717. SIGMA54_1. 1 hit. PS00718. SIGMA54_2. 1 hit. PS50044. SIGMA54_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9M7A3_BRUC2

Accession

Primary (citable) accession number: A9M7A3

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)