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A9M7A3 (A9M7A3_BRUC2) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
RNA polymerase sigma-54 factor PIRNR PIRNR000774
Gene names
Name:rpoN EMBL ABX61262.1
Ordered Locus Names:BCAN_A0163 EMBL ABX61262.1
OrganismBrucella canis (strain ATCC 23365 / NCTC 10854) [Complete proteome] [HAMAP] EMBL ABX61262.1
Taxonomic identifier483179 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella

Protein attributes

Sequence length500 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released By similarity. PIRNR PIRNR000774

Sequence similarities

Belongs to the sigma-54 factor family. PIRNR PIRNR000774

Sequences

Sequence LengthMass (Da)Tools
A9M7A3 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: EE924E11655E701E

FASTA50054,976
        10         20         30         40         50         60 
MALSPKLDIR QSQSLVMTPQ LMQSIKLLQM THIELDQFLD MEIEKNPLLD RIEADSDDLA 

        70         80         90        100        110        120 
GGEPASGADD PTESADNDDW FQTEGAGAAE NLSATFDNSL ENIFPDDLGS SQEQWKLSAG 

       130        140        150        160        170        180 
EGAFSGNGYD IDQVTAGRLS LSDYVAEQIV LGFSKAADRF IATALADALD ESGYLRIDIV 

       190        200        210        220        230        240 
GLAHNLGIET AEIGRILGVL QGFDPPGLFA RDLRECLAIQ LRLKDRFDPA MEALIANLDL 

       250        260        270        280        290        300 
LARRDFATLQ KICGVDQADL IDMLAEIRAL DSKPGARFEV SVADTIVPDV LVFSARDGGW 

       310        320        330        340        350        360 
AIELNPATMP RLIVNNEYYA EVSGSVKTEE KAFLTDCMQT AGWLVRSLDQ RARTILKVAQ 

       370        380        390        400        410        420 
EIVRQQDGFL RHGVAHLKPL NLRMVADAVG MHESTISRVT ANKFMATPRG VFELRYFFTA 

       430        440        450        460        470        480 
SLASSEGGEA HSSESVRHRI RQVIEAEKPD EVLSDDAIVD ALKKDGVDIA RRTVAKYREA 

       490        500 
MNIASSVQRR REKKARFSTP 

« Hide

References

[1]"Brucella canis ATCC 23365 whole genome shotgun sequencing project."
Setubal J.C., Bowns C., Boyle S., Crasta O.R., Czar M.J., Dharmanolla C., Gillespie J.J., Kenyon R.W., Lu J., Mane S., Mohapatra S., Nagrani S., Purkayastha A., Rajasimha H.K., Shallom J.M., Shallom S., Shukla M., Snyder E.E. expand/collapse author list , Sobral B.W., Wattam A.R., Will R., Williams K., Yoo H., Bruce D., Detter C., Munk C., Brettin T.S.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 23365 / NCTC 10854.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000872 Genomic DNA. Translation: ABX61262.1.
RefSeqYP_001592033.1. NC_010103.1.

3D structure databases

ProteinModelPortalA9M7A3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING483179.BCAN_A0163.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX61262; ABX61262; BCAN_A0163.
GeneID5784589.
KEGGbcs:BCAN_A0163.
PATRIC17828974. VBIBruCan25663_0165.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1508.
HOGENOMHOG000071904.
KOK03092.
OMATQKFMHT.
OrthoDBEOG60CWN7.
ProtClustDBPRK05932.

Enzyme and pathway databases

BioCycBCAN483179:GJ7I-162-MONOMER.

Family and domain databases

InterProIPR000394. RNA_pol_sigma_54.
IPR007046. RNA_pol_sigma_54_core-bd.
IPR007634. RNA_pol_sigma_54_DNA-bd.
[Graphical view]
PfamPF00309. Sigma54_AID. 1 hit.
PF04963. Sigma54_CBD. 1 hit.
PF04552. Sigma54_DBD. 1 hit.
[Graphical view]
PIRSFPIRSF000774. RpoN. 1 hit.
PRINTSPR00045. SIGMA54FCT.
TIGRFAMsTIGR02395. rpoN_sigma. 1 hit.
PROSITEPS00717. SIGMA54_1. 1 hit.
PS00718. SIGMA54_2. 1 hit.
PS50044. SIGMA54_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROA9M7A3.

Entry information

Entry nameA9M7A3_BRUC2
AccessionPrimary (citable) accession number: A9M7A3
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: February 19, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)