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A9M7A3

- A9M7A3_BRUC2

UniProt

A9M7A3 - A9M7A3_BRUC2

Protein

RNA polymerase sigma-54 factor

Gene

rpoN

Organism
Brucella canis (strain ATCC 23365 / NCTC 10854)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.UniRule annotation

    GO - Molecular functioni

    1. DNA binding Source: UniProtKB-KW
    2. DNA-directed RNA polymerase activity Source: UniProtKB-KW
    3. sequence-specific DNA binding transcription factor activity Source: InterPro
    4. sigma factor activity Source: UniProtKB-KW

    GO - Biological processi

    1. DNA-templated transcription, initiation Source: InterPro

    Keywords - Molecular functioni

    NucleotidyltransferaseUniRule annotation, Sigma factorUniRule annotation, Transferase

    Keywords - Biological processi

    Transcription, Transcription regulation

    Keywords - Ligandi

    DNA-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciBCAN483179:GJ7I-162-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    RNA polymerase sigma-54 factorUniRule annotation
    Gene namesi
    Name:rpoNImported
    Ordered Locus Names:BCAN_A0163Imported
    OrganismiBrucella canis (strain ATCC 23365 / NCTC 10854)Imported
    Taxonomic identifieri483179 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
    ProteomesiUP000001385: Chromosome I

    Subcellular locationi

    Keywords - Cellular componenti

    DNA-directed RNA polymeraseUniRule annotation

    Interactioni

    Protein-protein interaction databases

    STRINGi483179.BCAN_A0163.

    Structurei

    3D structure databases

    ProteinModelPortaliA9M7A3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the sigma-54 factor family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1508.
    HOGENOMiHOG000071904.
    KOiK03092.
    OMAiDDSEWGG.
    OrthoDBiEOG60CWN7.

    Family and domain databases

    InterProiIPR000394. RNA_pol_sigma_54.
    IPR007046. RNA_pol_sigma_54_core-bd.
    IPR007634. RNA_pol_sigma_54_DNA-bd.
    [Graphical view]
    PfamiPF00309. Sigma54_AID. 1 hit.
    PF04963. Sigma54_CBD. 1 hit.
    PF04552. Sigma54_DBD. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000774. RpoN. 1 hit.
    PRINTSiPR00045. SIGMA54FCT.
    TIGRFAMsiTIGR02395. rpoN_sigma. 1 hit.
    PROSITEiPS00717. SIGMA54_1. 1 hit.
    PS00718. SIGMA54_2. 1 hit.
    PS50044. SIGMA54_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A9M7A3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MALSPKLDIR QSQSLVMTPQ LMQSIKLLQM THIELDQFLD MEIEKNPLLD    50
    RIEADSDDLA GGEPASGADD PTESADNDDW FQTEGAGAAE NLSATFDNSL 100
    ENIFPDDLGS SQEQWKLSAG EGAFSGNGYD IDQVTAGRLS LSDYVAEQIV 150
    LGFSKAADRF IATALADALD ESGYLRIDIV GLAHNLGIET AEIGRILGVL 200
    QGFDPPGLFA RDLRECLAIQ LRLKDRFDPA MEALIANLDL LARRDFATLQ 250
    KICGVDQADL IDMLAEIRAL DSKPGARFEV SVADTIVPDV LVFSARDGGW 300
    AIELNPATMP RLIVNNEYYA EVSGSVKTEE KAFLTDCMQT AGWLVRSLDQ 350
    RARTILKVAQ EIVRQQDGFL RHGVAHLKPL NLRMVADAVG MHESTISRVT 400
    ANKFMATPRG VFELRYFFTA SLASSEGGEA HSSESVRHRI RQVIEAEKPD 450
    EVLSDDAIVD ALKKDGVDIA RRTVAKYREA MNIASSVQRR REKKARFSTP 500
    Length:500
    Mass (Da):54,976
    Last modified:February 5, 2008 - v1
    Checksum:iEE924E11655E701E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000872 Genomic DNA. Translation: ABX61262.1.
    RefSeqiYP_001592033.1. NC_010103.1.

    Genome annotation databases

    EnsemblBacteriaiABX61262; ABX61262; BCAN_A0163.
    GeneIDi5784589.
    KEGGibcs:BCAN_A0163.
    PATRICi17828974. VBIBruCan25663_0165.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000872 Genomic DNA. Translation: ABX61262.1 .
    RefSeqi YP_001592033.1. NC_010103.1.

    3D structure databases

    ProteinModelPortali A9M7A3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 483179.BCAN_A0163.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABX61262 ; ABX61262 ; BCAN_A0163 .
    GeneIDi 5784589.
    KEGGi bcs:BCAN_A0163.
    PATRICi 17828974. VBIBruCan25663_0165.

    Phylogenomic databases

    eggNOGi COG1508.
    HOGENOMi HOG000071904.
    KOi K03092.
    OMAi DDSEWGG.
    OrthoDBi EOG60CWN7.

    Enzyme and pathway databases

    BioCyci BCAN483179:GJ7I-162-MONOMER.

    Miscellaneous databases

    PROi A9M7A3.

    Family and domain databases

    InterProi IPR000394. RNA_pol_sigma_54.
    IPR007046. RNA_pol_sigma_54_core-bd.
    IPR007634. RNA_pol_sigma_54_DNA-bd.
    [Graphical view ]
    Pfami PF00309. Sigma54_AID. 1 hit.
    PF04963. Sigma54_CBD. 1 hit.
    PF04552. Sigma54_DBD. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000774. RpoN. 1 hit.
    PRINTSi PR00045. SIGMA54FCT.
    TIGRFAMsi TIGR02395. rpoN_sigma. 1 hit.
    PROSITEi PS00717. SIGMA54_1. 1 hit.
    PS00718. SIGMA54_2. 1 hit.
    PS50044. SIGMA54_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 23365 / NCTC 10854Imported.

    Entry informationi

    Entry nameiA9M7A3_BRUC2
    AccessioniPrimary (citable) accession number: A9M7A3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3