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A9M5P8

- RL23_BRUC2

UniProt

A9M5P8 - RL23_BRUC2

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Protein

50S ribosomal protein L23

Gene
rplW, BCAN_A1254
Organism
Brucella canis (strain ATCC 23365 / NCTC 10854)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome By similarity.UniRule annotation

GO - Molecular functioni

  1. nucleotide binding Source: InterPro
  2. rRNA binding Source: UniProtKB-HAMAP
  3. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBCAN483179:GJ7I-1242-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L23
Gene namesi
Name:rplW
Ordered Locus Names:BCAN_A1254
OrganismiBrucella canis (strain ATCC 23365 / NCTC 10854)
Taxonomic identifieri483179 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBrucellaceaeBrucella
ProteomesiUP000001385: Chromosome I

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 979750S ribosomal protein L23UniRule annotationPRO_1000087207Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Contacts protein L29, and trigger factor when it is bound to the ribosome By similarity.

Protein-protein interaction databases

STRINGi483179.BCAN_A1254.

Structurei

3D structure databases

ProteinModelPortaliA9M5P8.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0089.
HOGENOMiHOG000231364.
KOiK02892.
OMAiMSANLNQ.
OrthoDBiEOG6HTP4P.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
HAMAPiMF_01369_B. Ribosomal_L23_B.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
[Graphical view]
PfamiPF00276. Ribosomal_L23. 1 hit.
[Graphical view]
SUPFAMiSSF54189. SSF54189. 1 hit.

Sequencei

Sequence statusi: Complete.

A9M5P8-1 [UniParc]FASTAAdd to Basket

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MTDLRHYDVI VSPVITEKST MVSEHNQVVF NVARKATKPE IKAAVEALFG   50
VKVTAVNTAV RKGKVKRFRG LVGRQSDVKK AIVTLAEGQS IDVSTGL 97
Length:97
Mass (Da):10,535
Last modified:February 5, 2008 - v1
Checksum:iA485EE3886022FA3
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000872 Genomic DNA. Translation: ABX62303.1.
RefSeqiYP_001593074.1. NC_010103.1.

Genome annotation databases

EnsemblBacteriaiABX62303; ABX62303; BCAN_A1254.
GeneIDi5785438.
KEGGibcs:BCAN_A1254.
PATRICi17831204. VBIBruCan25663_1260.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000872 Genomic DNA. Translation: ABX62303.1 .
RefSeqi YP_001593074.1. NC_010103.1.

3D structure databases

ProteinModelPortali A9M5P8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 483179.BCAN_A1254.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABX62303 ; ABX62303 ; BCAN_A1254 .
GeneIDi 5785438.
KEGGi bcs:BCAN_A1254.
PATRICi 17831204. VBIBruCan25663_1260.

Phylogenomic databases

eggNOGi COG0089.
HOGENOMi HOG000231364.
KOi K02892.
OMAi MSANLNQ.
OrthoDBi EOG6HTP4P.

Enzyme and pathway databases

BioCyci BCAN483179:GJ7I-1242-MONOMER.

Family and domain databases

Gene3Di 3.30.70.330. 1 hit.
HAMAPi MF_01369_B. Ribosomal_L23_B.
InterProi IPR012677. Nucleotide-bd_a/b_plait.
IPR012678. Ribosomal_L23/L15e_core_dom.
IPR013025. Ribosomal_L25/23.
[Graphical view ]
Pfami PF00276. Ribosomal_L23. 1 hit.
[Graphical view ]
SUPFAMi SSF54189. SSF54189. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 23365 / NCTC 10854.

Entry informationi

Entry nameiRL23_BRUC2
AccessioniPrimary (citable) accession number: A9M5P8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 5, 2008
Last modified: May 14, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi