Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

DNA ligase

Gene

NMCC_0138

Organism
Neisseria meningitidis serogroup C (strain 053442)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciNMEN374833:GJ7Z-137-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:NMCC_0138Imported
OrganismiNeisseria meningitidis serogroup C (strain 053442)Imported
Taxonomic identifieri374833 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
ProteomesiUP000001177 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi374833.NMCC_0138.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9M096-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKKIIGGII PIFTAVFIPA SAGAADLMLA QEYKGQDIAG WAMSEKLDGV
60 70 80 90 100
RAYWDGKHLI SRQGYAFAPP KGFTAQFPPY PLDGELYSGR GQFEQISATV
110 120 130 140 150
RSVSSDWRGI RLHVFDVPKA QGNLYQRLAV ATQWLKTHPN APITIIPQIK
160 170 180 190 200
VRDRQHAMDF LKQIEAQGGE GVMLRQPESR YSGGRSSQLL KLKSQYDDEC
210 220 230 240 250
TVTRHYEGKG RNAGRLGAVG CKNRHGEFRI GSGFKDKDRD NPPKIGTLIT
260 270
YRYRGFTRKG TPKFATFVRA RTDR
Length:274
Mass (Da):30,679
Last modified:February 5, 2008 - v1
Checksum:iCFDDCEC5673CDB8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000381 Genomic DNA. Translation: ABX72357.1.
RefSeqiYP_001598310.1. NC_010120.1.

Genome annotation databases

EnsemblBacteriaiABX72357; ABX72357; NMCC_0138.
KEGGinmn:NMCC_0138.
PATRICi20344444. VBINeiMen117761_0156.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000381 Genomic DNA. Translation: ABX72357.1.
RefSeqiYP_001598310.1. NC_010120.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi374833.NMCC_0138.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX72357; ABX72357; NMCC_0138.
KEGGinmn:NMCC_0138.
PATRICi20344444. VBINeiMen117761_0156.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiEOG60919Q.

Enzyme and pathway databases

BioCyciNMEN374833:GJ7Z-137-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Characterization of ST-4821 complex, a unique Neisseria meningitidis clone."
    Peng J., Yang L., Yang F., Yang J., Yan Y., Nie H., Zhang X., Xiong Z., Jiang Y., Cheng F., Xu X., Chen S., Sun L., Li W., Shen Y., Shao Z., Liang X., Xu J., Jin Q.
    Genomics 91:78-87(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 053442Imported.

Entry informationi

Entry nameiA9M096_NEIM0
AccessioniPrimary (citable) accession number: A9M096
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 1, 2015
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.