A9L4U3 (RS20_SHEB9) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
30S ribosomal protein S20

Gene names

Name:	rpsT
Ordered Locus Names:	Sbal195_1152

Organism

Shewanella baltica (strain OS195) [Complete proteome] [HAMAP]

Taxonomic identifier

399599 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella baltica

Protein attributes

Sequence length	88 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 16S ribosomal RNA By similarity. HAMAP-Rule MF_00500
Sequence similarities	Belongs to the ribosomal protein S20P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 88	88	30S ribosomal protein S20 HAMAP-Rule MF_00500		PRO_1000081448

Sequences

	Sequence		Length	Mass (Da)
	A9L4U3 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 504801377FEA932E	FASTA	88	9,690
	10 20 30 40 50 60 MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTAAEA FAVAQPIVDR 70 80 MATKGLIHKN KAARQKARLN AKIKAIAA

References

[1]

"Complete sequence of chromosome of Shewanella baltica OS195." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. , Brettar I., Rodrigues J., Konstantinidis K., Klappenbach J., Hofle M., Tiedje J., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS195.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000891 Genomic DNA. Translation: ABX48328.1.
RefSeq	YP_001553588.1. NC_009997.1.
3D structure databases
ProteinModelPortal	A9L4U3.
SMR	A9L4U3. Positions 3-87.
ModBase	Search...
Protein-protein interaction databases
STRING	399599.Sbal195_1152.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABX48328; ABX48328; Sbal195_1152.
GeneID	5752879.
KEGG	sbn:Sbal195_1152.
PATRIC	23468364. VBISheBal33754_1200.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0268.
HOGENOM	HOG000097048.
KO	K02968.
OMA	QNAHNSS.
ProtClustDB	PRK00239.
Enzyme and pathway databases
BioCyc	SBAL399599:GH6B-1187-MONOMER.
Family and domain databases
Gene3D	1.20.58.110. 1 hit.
HAMAP	MF_00500. Ribosomal_S20.
InterPro	IPR002583. Ribosomal_S20. [Graphical view]
Pfam	PF01649. Ribosomal_S20p. 1 hit. [Graphical view]
ProDom	PD004231. Ribosomal_S20. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF46992. Ribosomal_S20p. 1 hit.
TIGRFAMs	TIGR00029. S20. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RS20_SHEB9

Accession

Primary (citable) accession number: A9L4U3

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	February 5, 2008
Last modified:	May 29, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program