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Protein
Submitted name:

Type III secretion outer membrane pore, YscC/HrcC family

Gene

Sbal195_2249

Organism
Shewanella baltica (strain OS195)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Enzyme and pathway databases

BioCyciSBAL399599:GH6B-2314-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Type III secretion outer membrane pore, YscC/HrcC familyImported
Gene namesi
Ordered Locus Names:Sbal195_2249Imported
OrganismiShewanella baltica (strain OS195)Imported
Taxonomic identifieri399599 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
Proteomesi
  • UP000000770 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence analysisAdd
BLAST
Chaini19 – 491473Sequence analysisPRO_5002740026Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini178 – 26790Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000245123.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9L1Z9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKLLSLLLL CQMGLAQAAP LTNIKWQGEP FVMISRGTAL TSVIQDFASN
60 70 80 90 100
YGVPVIVSNK VNDNYIGQIQ EQDPKSVIQD LTRRYGLVWY YNNEVLYVYK
110 120 130 140 150
ASEINSEVLP LTSLSATKVD HYLRSAGVLD KGVCNIKSMA GISGLQVTGV
160 170 180 190 200
PECINSVTKL TAQLDANAKQ TTENQETVKV YPLKYASATD SIYEYRSQPV
210 220 230 240 250
SIPGLVTVLK EMDQGTQVAN AVAGSVSNIS GPVFAADPRQ NAIIVRGSAR
260 270 280 290 300
DMATYGSLIR QLDTKPSMIE VSVSIFDVDA SDFKQLGIDW SASAKLGGGS
310 320 330 340 350
VSFNSGDSSD NFSTVIGNTG NFMMRLNALE KNSKAKVLSR PSVVTLNNVQ
360 370 380 390 400
AVLDKNVTFY TKLEGDKVAK LESVTTGSLL RVTPRLIDEV GHQAVMLDLN
410 420 430 440 450
IQDGQQSQAV SRSEPLPQVQ NSEISTQATL KSGESLLLGG FVQDRDETTQ
460 470 480 490
NKIPLLGDLP LLGGLFRSTD HHTQSVMRLF LIKAEPVNQG D
Length:491
Mass (Da):53,189
Last modified:February 5, 2008 - v1
Checksum:i316A8AD27BACC0EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000891 Genomic DNA. Translation: ABX49417.1.
RefSeqiWP_012197133.1. NC_009997.1.

Genome annotation databases

EnsemblBacteriaiABX49417; ABX49417; Sbal195_2249.
GeneIDi11772391.
KEGGisbn:Sbal195_2249.
sbt:Sbal678_2258.
PATRICi23470661. VBISheBal33754_2324.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000891 Genomic DNA. Translation: ABX49417.1.
RefSeqiWP_012197133.1. NC_009997.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX49417; ABX49417; Sbal195_2249.
GeneIDi11772391.
KEGGisbn:Sbal195_2249.
sbt:Sbal678_2258.
PATRICi23470661. VBISheBal33754_2324.

Phylogenomic databases

HOGENOMiHOG000245123.
KOiK03219.
OMAiNAVIVHD.
OrthoDBiPOG091H00DF.

Enzyme and pathway databases

BioCyciSBAL399599:GH6B-2314-MONOMER.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR004845. T2SS_GspD_CS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
PROSITEiPS00875. T2SP_D. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA9L1Z9_SHEB9
AccessioniPrimary (citable) accession number: A9L1Z9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: September 7, 2016
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.