A9KYW9 (A9KYW9_SHEB9) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ABX49057.1

Gene names

Ordered Locus Names:

Sbal195_1886 EMBL ABX49057.1

Organism

Shewanella baltica (strain OS195) [Complete proteome] [HAMAP] EMBL ABX49057.1

Taxonomic identifier

399599 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Shewanellaceae › Shewanella › Shewanella baltica

Protein attributes

Sequence length	315 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABX49057.1
Molecular function	Ligase EMBL ABX49057.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 43	43	Potential EMBL ABX49057.1
	Chain	44 – 315	272	Potential		PRO_5000296899

Sequences

	Sequence		Length	Mass (Da)
	A9KYW9 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: EB1A5DBE4D1CBDB8	FASTA	315	35,416
	10 20 30 40 50 60 MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LILGCLAPVT YAQNSPPSIQ LATEFDAQQE 70 80 90 100 110 120 IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA NFPNYPLDGE LWLGRGQFEA 130 140 150 160 170 180 MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG DFQHRYQFAL TKLSGKSHYL EVIAQFQVDS 190 200 210 220 230 240 LEALYQKLDS LVAKGAEGLM LHRSSAMYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA 250 260 270 280 290 300 GQMGAIRVQT PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRI 310 DLDESNKVIS SQEGN

References

[1]

"Complete sequence of chromosome of Shewanella baltica OS195." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E. , Brettar I., Rodrigues J., Konstantinidis K., Klappenbach J., Hofle M., Tiedje J., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OS195 EMBL ABX49057.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000891 Genomic DNA. Translation: ABX49057.1.
RefSeq	YP_001554317.1. NC_009997.1.
3D structure databases
ProteinModelPortal	A9KYW9.
ModBase	Search...
Protein-protein interaction databases
STRING	399599.Sbal195_1886.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABX49057; ABX49057; Sbal195_1886.
GeneID	5753629.
KEGG	sbn:Sbal195_1886.
PATRIC	23469891. VBISheBal33754_1952.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000293070.
KO	K01971.
OMA	VRGYWDG.
ProtClustDB	PRK09125.
Enzyme and pathway databases
BioCyc	SBAL399599:GH6B-1938-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9KYW9_SHEB9

Accession

Primary (citable) accession number: A9KYW9

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 29, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)