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A9KYW9

- A9KYW9_SHEB9

UniProt

A9KYW9 - A9KYW9_SHEB9

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Protein
Submitted name:

ATP dependent DNA ligase

Gene
Sbal195_1886
Organism
Shewanella baltica (strain OS195)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSBAL399599:GH6B-1938-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Sbal195_1886Imported
OrganismiShewanella baltica (strain OS195)Imported
Taxonomic identifieri399599 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
ProteomesiUP000000770: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 4343 PredictedImportedAdd
BLAST
Chaini44 – 315272 PredictedImportedPRO_5000296899Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi399599.Sbal195_1886.

Structurei

3D structure databases

ProteinModelPortaliA9KYW9.

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OMAiGKGQFEN.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

A9KYW9-1 [UniParc]FASTAAdd to Basket

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MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LILGCLAPVT YAQNSPPSIQ    50
LATEFDAQQE IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA 100
NFPNYPLDGE LWLGRGQFEA MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG 150
DFQHRYQFAL TKLSGKSHYL EVIAQFQVDS LEALYQKLDS LVAKGAEGLM 200
LHRSSAMYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA GQMGAIRVQT 250
PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRI 300
DLDESNKVIS SQEGN 315
Length:315
Mass (Da):35,416
Last modified:February 5, 2008 - v1
Checksum:iEB1A5DBE4D1CBDB8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000891 Genomic DNA. Translation: ABX49057.1.
RefSeqiYP_001554317.1. NC_009997.1.

Genome annotation databases

EnsemblBacteriaiABX49057; ABX49057; Sbal195_1886.
GeneIDi5753629.
KEGGisbn:Sbal195_1886.
PATRICi23469891. VBISheBal33754_1952.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP000891 Genomic DNA. Translation: ABX49057.1 .
RefSeqi YP_001554317.1. NC_009997.1.

3D structure databases

ProteinModelPortali A9KYW9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 399599.Sbal195_1886.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ABX49057 ; ABX49057 ; Sbal195_1886 .
GeneIDi 5753629.
KEGGi sbn:Sbal195_1886.
PATRICi 23469891. VBISheBal33754_1952.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OMAi GKGQFEN.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci SBAL399599:GH6B-1938-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: OS195Imported.

Entry informationi

Entry nameiA9KYW9_SHEB9
AccessioniPrimary (citable) accession number: A9KYW9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: June 11, 2014
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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