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A9KYW9

- A9KYW9_SHEB9

UniProt

A9KYW9 - A9KYW9_SHEB9

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Sbal195_1886

Organism
Shewanella baltica (strain OS195)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 43 (01 Oct 2014)
      Sequence version 1 (05 Feb 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSBAL399599:GH6B-1938-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Sbal195_1886Imported
    OrganismiShewanella baltica (strain OS195)Imported
    Taxonomic identifieri399599 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesShewanellaceaeShewanella
    ProteomesiUP000000770: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 4343 PotentialImportedAdd
    BLAST
    Chaini44 – 315272 PotentialImportedPRO_5000296899Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi399599.Sbal195_1886.

    Structurei

    3D structure databases

    ProteinModelPortaliA9KYW9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    A9KYW9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LILGCLAPVT YAQNSPPSIQ    50
    LATEFDAQQE IHIQDFLVSE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA 100
    NFPNYPLDGE LWLGRGQFEA MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG 150
    DFQHRYQFAL TKLSGKSHYL EVIAQFQVDS LEALYQKLDS LVAKGAEGLM 200
    LHRSSAMYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA GQMGAIRVQT 250
    PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRI 300
    DLDESNKVIS SQEGN 315
    Length:315
    Mass (Da):35,416
    Last modified:February 5, 2008 - v1
    Checksum:iEB1A5DBE4D1CBDB8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000891 Genomic DNA. Translation: ABX49057.1.
    RefSeqiYP_001554317.1. NC_009997.1.

    Genome annotation databases

    EnsemblBacteriaiABX49057; ABX49057; Sbal195_1886.
    GeneIDi5753629.
    KEGGisbn:Sbal195_1886.
    PATRICi23469891. VBISheBal33754_1952.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000891 Genomic DNA. Translation: ABX49057.1 .
    RefSeqi YP_001554317.1. NC_009997.1.

    3D structure databases

    ProteinModelPortali A9KYW9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 399599.Sbal195_1886.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABX49057 ; ABX49057 ; Sbal195_1886 .
    GeneIDi 5753629.
    KEGGi sbn:Sbal195_1886.
    PATRICi 23469891. VBISheBal33754_1952.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci SBAL399599:GH6B-1938-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: OS195Imported.

    Entry informationi

    Entry nameiA9KYW9_SHEB9
    AccessioniPrimary (citable) accession number: A9KYW9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 5, 2008
    Last sequence update: February 5, 2008
    Last modified: October 1, 2014
    This is version 43 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3