A9KT31 (A9KT31_CLOPH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate binding family 6 EMBL ABX42242.1

Gene names

Ordered Locus Names:

Cphy_1873

Organism

Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]

Taxonomic identifier

357809 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	1091 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABX42242.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 30	30	Potential EMBL ABX42242.1
	Chain	31 – 1091	1061	Potential EMBL ABX42242.1		PRO_5000296440

Sequences

	Sequence		Length	Mass (Da)
	A9KT31 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 45A59B87225EA9AD	FASTA	1,091	118,213
	10 20 30 40 50 60 MNRRIKKVIS YVLFFALLIQ LSSFKVVYAS TNQYEAENAL LSGGAVYAND HSGYTGTGFV 70 80 90 100 110 120 GGFTDSNKGN AKVEFQIPAS KSSQFKLSLR YANGTGSEKT LSLWVDGNFY KQLYFPATAN 130 140 150 160 170 180 WDSWNSIIET IYLSQGMHSI TYFFGNSDSG NVNIDNLHVE SLEPTVIPGK VEAENYIRMN 190 200 210 220 230 240 GIATEDCAEG TQNVGWIHNG DWLEYSVNVS ESAKYRVDYR IAGVNNSTQI LVQVGNNTLA 250 260 270 280 290 300 TTNIVNTGGW QVYQTVSSKT FQLNAGIQTI RIYFTGEGVN FNYFNIVKDN QTPPVEGGKP 310 320 330 340 350 360 DLIVTDISWI PNNPVNGEEV TFKAVIKNQG DGASPQGVIH GVAFLVNGTT VSWSDNVTTS 370 380 390 400 410 420 IPAGSSITVT ANGGPYNKGS WTAATGNYTI RAIVDDINRI DESNENNNTY DKTMVVDVPK 430 440 450 460 470 480 KPDLTVTDIT WQPSAPVAGN LVTFSAVVEN KGTVATLSGI PCNLSFYVNG IKVSWVSNYT 490 500 510 520 530 540 SSIPAGGKVT LTQTGGNFIA TNGIHNVRAV VDEENLIDEI DETNNSFGKS LSIGVVENYG 550 560 570 580 590 600 ATVPYDTYEA EAQNLMGASL ISYDTTWCSV ASEASGRRAV RLEKGQSIEF TIKNKAQGIV 610 620 630 640 650 660 VRYSMPDSAT GADIYQNLSV YVNGVHTTDM TFTNRYAHQY GQYGSDGGEM QWSNTPGINH 670 680 690 700 710 720 HRYFDESRIL LEKEYASRSS FKLQWDANDY NPNGSSYIII DFIETEAVPQ ALTKPSNYVS 730 740 750 760 770 780 ITDFGAIPND GLDDTAAMNA AIKAVNGTTI KGIWIPEGTF HFNTGTRGQT KIKLPKGVSV 790 800 810 820 830 840 QGAGMWRSTL TGAFAGFYLQ EGNVTLADFT IKAEETYRSN ASGIAGLEGN AQNSTIINLW 850 860 870 880 890 900 IQHTKVGLWL NEGTVNALVS KCRVRDTWAD GINLNGGTKD TIVEHCNFRN TGDDGMAMWS 910 920 930 940 950 960 KSLNGGSGTV ENCTFRNNTV QIPNLANGIG IYGGKNNTVS NNLILDVVDN GSGIQFGTNH 970 980 990 1000 1010 1020 GPSAFTGTLT ISNNKLVRAG SWHHDYGYQI GAIWGYWINN NGLAQNLTVS VSNNLIDSSI 1030 1040 1050 1060 1070 1080 YSGIFTEESN VGTTVKFTDN RINNSGTYGV HIRDSARGSA VFQNNTANGS GLVNFKNDSP 1090 NFTVSGTGNS W

References

[1]

"Complete genome sequence of Clostridium phytofermentans ISDg." Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000885 Genomic DNA. Translation: ABX42242.1.
RefSeq	YP_001558981.1. NC_010001.1.
3D structure databases
ProteinModelPortal	A9KT31.
ModBase	Search...
Protein-protein interaction databases
STRING	A9KT31.
Protein family/group databases
CAZy	CBM35. Carbohydrate-Binding Module Family 35. CBM6. Carbohydrate-Binding Module Family 6. GH87. Glycoside Hydrolase Family 87.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5743162.
GenomeReviews	Gene locus Cphy_1873 in contig CP000885_GR.
KEGG	cpy:Cphy_1873.
PATRIC	19503404. VBICloPhy16213_1941.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	VWIEHAN.
Family and domain databases
InterPro	IPR011635. APHP. IPR006584. Cellulose-bd_IV. IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF07705. CARDB. 2 hits. PF03422. CBM_6. 2 hits. [Graphical view]
SMART	SM00606. CBD_IV. 1 hit. SM00710. PbH1. 8 hits. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 2 hits. SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS51175. CBM6. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9KT31_CLOPH

Accession

Primary (citable) accession number: A9KT31

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)