Skip Header

Contribute Send feedback
Read comments (?) or add your own

A9KRL9 (A9KRL9_CLOPH) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Alpha-glucuronidase EMBL ABX43513.1
EC=3.2.1.139 EMBL ABX43513.1
Gene names
Ordered Locus Names:Cphy_3158
OrganismClostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]
Taxonomic identifier357809 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length684 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ABX43513.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processxylan catabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-glucuronidase activity

Inferred from electronic annotation. Source: EC

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A9KRL9 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: BA099B255052BEC7

FASTA68478,496
        10         20         30         40         50         60 
MEEEVVLTFN IKKGDGTMGF EKAWLNYYKS DNLAMRDYFT VVTYNKDDSI VKSAVLELTT 

        70         80         90        100        110        120 
AAKELFSIDI ESSLCDMKSD VDKTRKGIHF QIGDNKDLEN EGYRISLADE MLLIEAYTSN 

       130        140        150        160        170        180 
GILYGTFDLI RSTILGADVH SFNRTIFPKN PLRMLNHWDN MDGSIERGYS GNSFFFEHGE 

       190        200        210        220        230        240 
VIVNERTKAY ARLVSSVGIN AVVINNVNVR GTATNLITNR YIDKLKQIGE IFASYGIKLY 

       250        260        270        280        290        300 
LSLNFAAPME LGGLTSADPL DEEVRLWWKK EVQLLFKEIP SFGGFLVKAD SEGRPGPFTY 

       310        320        330        340        350        360 
QRTHAEGANM LAEAVKPYGG LIIWRCFVYN CKQDWRDMKT DRARASFDNF QSLDGDFAEN 

       370        380        390        400        410        420 
VILQVKNGPM DFQVREPISP LFGGMKKTNL MLEVQIAQEY TGQQRHVCYL IPMFKEILKF 

       430        440        450        460        470        480 
RTYCKEENDT VFDIVSGNTY GNKNAGMAAV ANTGNDDNWT GHDLAAANLY GYGRLSFDPD 

       490        500        510        520        530        540 
LTSEEIAKEW ITLTFGMKEH VIDYISKILM MSWPAYEKYT SPLGIGWMVN PSHHYGPNVD 

       550        560        570        580        590        600 
GYEYDRWGTY HKADHTAIGV DRTKNGTGYT TQYHQPNQEL YGTPETCPEE LLLFFHRIPY 

       610        620        630        640        650        660 
TYQLKTGKTL IQHIYDSHFE GVEDVEEMVK LWEELKGKLE EVPYHRVLHR LQEQLEHSKE 

       670        680 
WRDVICSYFY RKTAIGDKKG RELY

« Hide

References

[1]"Complete genome sequence of Clostridium phytofermentans ISDg."
Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. expand/collapse author list , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000885 Genomic DNA. Translation: ABX43513.1.
RefSeqYP_001560252.1. NC_010001.1.

3D structure databases

ProteinModelPortalA9KRL9.
SMRA9KRL9. Positions 20-684.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9KRL9.

Protein family/group databases

CAZyGH67. Glycoside Hydrolase Family 67.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5743245.
GenomeReviewsGene locus Cphy_3158 in contig CP000885_GR.
KEGGcpy:Cphy_3158.
PATRIC19506154. VBICloPhy16213_3302.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG293196.
OMAHAEGANM.
ProtClustDBCLSK872917.

Family and domain databases

InterProIPR011395. Glyco_hydro_67_aGlcAse.
IPR005154. Glyco_hydro_67_aGlcAse_N.
IPR011099. Glyco_hydro_67_C.
IPR011100. Glyco_hydro_67_M.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.90.1330.10. Glyco_hydro_67_C. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01235.
PfamPF07477. Glyco_hydro_67C. 1 hit.
PF07488. Glyco_hydro_67M. 1 hit.
PF03648. Glyco_hydro_67N. 1 hit.
[Graphical view]
PIRSFPIRSF029900. Alpha-glucuronds. 1 hit.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9KRL9_CLOPH
AccessionPrimary (citable) accession number: A9KRL9
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info