A9KRL2 (A9KRL2_CLOPH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 85 EMBL ABX42086.1

Gene names

Ordered Locus Names:

Cphy_1714

Organism

Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]

Taxonomic identifier

357809 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	951 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABX42086.1
Molecular function	Hydrolase EMBL ABX42086.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell adhesion Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 25	25	Potential EMBL ABX42086.1
	Chain	26 – 951	926	Potential EMBL ABX42086.1		PRO_5000296371

Sequences

	Sequence		Length	Mass (Da)
	A9KRL2 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 103A4C84C0C92DBB	FASTA	951	105,902
	10 20 30 40 50 60 MKKQYYKFVS VALIATMFVT GCSKNSSDIK DNATNSEAVV TEAVQVPEKE QAPEENQAPG 70 80 90 100 110 120 KIVYRVTPES ESDMKMMNIP NAPYWFPAEL LEWNPKEAKD LDLYVSNVPL KSRVDKSKLV 130 140 150 160 170 180 KSNKTQIADF KVAALSIMNS RTSGNSPHGL NRFNANTFSY WQYVDQLVYW GGSAGEGLIV 190 200 210 220 230 240 PPTADVTEAA HTNGVPVLGT IFLAPEAWGG KIVWLDDFLK TDENGQFLLV DKLIEVCTVL 250 260 270 280 290 300 GFDGWFINQE MGGTKEAPLT KEHADKMLSF VQQFNEKSAG KFSFIWYDSM TEEGEIDYQN 310 320 330 340 350 360 ALTDKNDAFL VDGNGKKGAD SMFLNFWWAA RELADQELLV KSNEKAKEKG INPYDLYAGI 370 380 390 400 410 420 DVQANGVMTR INWDLFEKNN VPHTSIGLYC PSWTYFAADS LDAFERYENR MWVNEHGNPT 430 440 450 460 470 480 IPTEVSQYDW HGISTYAIEK TVVNQLPFIT NFNKGNGYNF FVNGEKISLQ DWNNRSITDV 490 500 510 520 530 540 MPTYRWILNQ EEGNKLKPGI DYADAYYGGN SIRLYGAMET DKKSELTLYS SDLAIGDKTK 550 560 570 580 590 600 AYAMLKANYK VNAELVLELE DGSKEYIKGD NTLNTEWAKI VFDLSKVKGK TVKKIGFNFT 610 620 630 640 650 660 SSKSDMILIN MGNLTIFEEN TVAPTTPGNL KIAYQQFDDD GLFAGVKLAW DGASNVRYYE 670 680 690 700 710 720 VYKINDDGSK SFQGATTAKA HYMNALVREE GEKKSTFEVI AVNNMQQRSQ GTTVVMEWPN 730 740 750 760 770 780 ISLPKANMKA SKTLVAPGEV VEFTSLCSQN TTGYEWSFEG ADHAASTEQN PKVTYSKEGV 790 800 810 820 830 840 YNVSLVAKNG EGTAEYKVDG LIVVRSDASG DIPVVSEGKT TSASGYVNEN EAPRFAVDGK 850 860 870 880 890 900 TNTKWCATGS APHDITIDLG ENKMVSEVYM AHAEKGNESS DMNTSWYTIE TSLDGKSFEP 910 920 930 940 950 AIEVKNNASA ETLDAFKPRE ARYVKVTVMK PTQGSDTAVR IYEIQVHGLD K

References

[1]

"Complete genome sequence of Clostridium phytofermentans ISDg." Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000885 Genomic DNA. Translation: ABX42086.1.
RefSeq	YP_001558825.1. NC_010001.1.
3D structure databases
ProteinModelPortal	A9KRL2.
ModBase	Search...
Protein-protein interaction databases
STRING	A9KRL2.
Protein family/group databases
CAZy	CBM32. Carbohydrate-Binding Module Family 32. GH85. Glycoside Hydrolase Family 85.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5741465.
GenomeReviews	Gene locus Cphy_1714 in contig CP000885_GR.
KEGG	cpy:Cphy_1714.
PATRIC	19503076. VBICloPhy16213_1777.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG348351.
OMA	YDSMTKD.
Family and domain databases
InterPro	IPR000421. Coagulation_fac_5/8-C_type_dom. IPR008979. Galactose-bd-like. IPR005201. Glyco_hydro_85. IPR022409. PKD/Chitinase_dom. IPR000601. PKD_dom. [Graphical view]
Gene3D	G3DSA:2.60.40.670. PKD. 1 hit.
Pfam	PF00754. F5_F8_type_C. 1 hit. PF03644. Glyco_hydro_85. 1 hit. PF00801. PKD. 1 hit. [Graphical view]
SMART	SM00231. FA58C. 1 hit. SM00089. PKD. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF49299. PKD. 1 hit.
PROSITE	PS50022. FA58C_3. 1 hit. PS50093. PKD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9KRL2_CLOPH

Accession

Primary (citable) accession number: A9KRL2

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)