A9KRD8 (A9KRD8_CLOPH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 12 EMBL ABX42012.1

Gene names

Ordered Locus Names:

Cphy_1640

Organism

Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]

Taxonomic identifier

357809 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	241 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ABX42012.1
Molecular function	Hydrolase EMBL ABX42012.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	polysaccharide catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cellulase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 28	28	Potential EMBL ABX42012.1
	Chain	29 – 241	213	Potential EMBL ABX42012.1		PRO_5000296355

Sequences

	Sequence		Length	Mass (Da)
	A9KRD8 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 4AB13BB453D4D00C	FASTA	241	26,285
	10 20 30 40 50 60 MKTKFKILVS LVFSFILISN FTLTAYAATW SSADQWATWS NGGYTIYNNV WGSGAGYQSI 70 80 90 100 110 120 WANSYSNWGV WAQHPNTGGI KSYPNVTKSI GKTLSSIKTL QSSFNVTRPS SGAYESAYDI 130 140 150 160 170 180 WSNGSSYEIM LWMNSYGSVA PISYNWDASG KPVPVYTNLS LGGHSWNVYQ GSNGSNPVYS 190 200 210 220 230 240 FVRTSSTNSG TVDILAILNW INGKGWFSGT QTVNLVQFGF EITSSSAGSD FICNSYSVTS N

References

[1]

"Complete genome sequence of Clostridium phytofermentans ISDg." Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000885 Genomic DNA. Translation: ABX42012.1.
RefSeq	YP_001558751.1. NC_010001.1.
3D structure databases
ProteinModelPortal	A9KRD8.
ModBase	Search...
Protein-protein interaction databases
STRING	A9KRD8.
Protein family/group databases
CAZy	GH12. Glycoside Hydrolase Family 12.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5744461.
GenomeReviews	Gene locus Cphy_1640 in contig CP000885_GR.
KEGG	cpy:Cphy_1640.
PATRIC	19502914. VBICloPhy16213_1696.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG374012.
OMA	GIKSYPN.
ProtClustDB	PRK06215.
Family and domain databases
InterPro	IPR008985. ConA-like_lec_gl. IPR013319. Glyco_hydro_11/12_cat. IPR002594. Glyco_hydro_12. [Graphical view]
Gene3D	G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.
Pfam	PF01670. Glyco_hydro_12. 1 hit. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9KRD8_CLOPH

Accession

Primary (citable) accession number: A9KRD8

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)