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A9KQ88 (A9KQ88_CLOPH) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 40. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Cphy_3043 EMBL ABX43400.1
OrganismClostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP] EMBL ABX43400.1
Taxonomic identifier357809 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length477 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A9KQ88 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 02F369FABF4C9627

FASTA47754,068
        10         20         30         40         50         60 
MSQDNYVSPL SERYASKEMQ YTFSPDMKFR TWRKLWIALA EAEHELGLPV TSEQVEELKA 

        70         80         90        100        110        120 
HQDDINYEVA KERERLVRHD VMSHVYAYGV QCPNAKGIIH LGATSCYVGD NTDIIVMTEG 

       130        140        150        160        170        180 
LKLVKKKLIC VMEELSKFAM KYRDLPTLAF THFQPAQPTT VGKRATLWLQ ELALDLEDLE 

       190        200        210        220        230        240 
HALSCMKLLG SKGTTGTQAS FLELFDGDHE KIKKLDALIA KKMGFEECFA VSGQTYSRKV 

       250        260        270        280        290        300 
DTRVLNVLAG IAASAHKFSN DIRLLQHLKE IEEPFEKNQI GSSAMAYKRN PMRSERIASL 

       310        320        330        340        350        360 
ARYVMVDALN PAITSATQWF ERTLDDSANK RLSVPEAFLA IDSILDLYMN VVDGLVVYPK 

       370        380        390        400        410        420 
VIEKRLMSEL PFMATENIMM DAVKAGGDRQ ELHERIRTLS MEAGRNVKEL GLENNLLELI 

       430        440        450        460        470 
AADPAFNMTL EDLKKVMEPS RYTGRAKEQT EEFIESVIRP ILEENNELLG FKAEINV 

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References

[1]"Complete genome sequence of Clostridium phytofermentans ISDg."
Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. expand/collapse author list , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700394 / DSM 18823 / ISDg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000885 Genomic DNA. Translation: ABX43400.1.
RefSeqYP_001560139.1. NC_010001.1.

3D structure databases

ProteinModelPortalA9KQ88.
SMRA9KQ88. Positions 1-465.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING357809.Cphy_3043.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX43400; ABX43400; Cphy_3043.
GeneID5743369.
KEGGcpy:Cphy_3043.
PATRIC19505910. VBICloPhy16213_3181.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0015.
HOGENOMHOG000033915.
KOK01756.
OMADQWNEGD.
OrthoDBEOG686NDB.
ProtClustDBPRK08937.

Enzyme and pathway databases

BioCycCPHY357809:GHCL-3097-MONOMER.

Family and domain databases

Gene3D1.10.275.10. 1 hit.
InterProIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR004769. Pur_lyase.
[Graphical view]
PANTHERPTHR11444. PTHR11444. 1 hit.
PTHR11444:SF2. PTHR11444:SF2. 1 hit.
PfamPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00149. FUMRATELYASE.
SMARTSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMSSF48557. SSF48557. 1 hit.
TIGRFAMsTIGR00928. purB. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9KQ88_CLOPH
AccessionPrimary (citable) accession number: A9KQ88
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: November 13, 2013
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)