A9KQ55 (A9KQ55_CLOPH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-1,4-beta-xylanase EMBL ABX43367.1
EC=3.2.1.8 EMBL ABX43367.1

Gene names

Ordered Locus Names:

Cphy_3010

Organism

Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]

Taxonomic identifier

357809 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	321 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432

Ontologies

Keywords
Biological process	Xylan degradation EMBL ABX43367.1
Molecular function	Glycosidase RuleBase RU003432 EMBL ABX43367.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9KQ55 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 5C7390BA487579AC	FASTA	321	38,053
	10 20 30 40 50 60 METLKEKYKD YFLIGAAVNA STIRTHGELI KDHFNSITCE NEMKFSNLCP REKEYQFEKA 70 80 90 100 110 120 DTIVQFAKDN ELKMRMHTLV WHNQTPEWVF LDTTKEGLEE RLSNHIHMLG KRYGKDCYSV 130 140 150 160 170 180 DVVNEAIEDK LDGFLRESSW LQGLGNDYIE RAFLLAKQEM PEAKLFYNDY NETNPIKRDK 190 200 210 220 230 240 IFKLIKELKE KGIPVDGIGM QCHINIYHSS MDELKEAIEK YLSLGVSIEI TEMDVSMFRH 250 260 270 280 290 300 EDRSEILKPT IEQYKAQARV YKECFQIFRE YKNDITSVTL WGVSDDVSWL NHFPVNNRRN 310 320 WPLLFDEMMK PKEAFYEIMN F

References

[1]

"Complete genome sequence of Clostridium phytofermentans ISDg." Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000885 Genomic DNA. Translation: ABX43367.1.
RefSeq	YP_001560106.1. NC_010001.1.
3D structure databases
ProteinModelPortal	A9KQ55.
ModBase	Search...
Protein-protein interaction databases
STRING	A9KQ55.
Protein family/group databases
CAZy	GH10. Glycoside Hydrolase Family 10.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5743336.
GenomeReviews	Gene locus Cphy_3010 in contig CP000885_GR.
KEGG	cpy:Cphy_3010.
PATRIC	19505840. VBICloPhy16213_3146.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG626574.
OMA	LDVSVYP.
Family and domain databases
InterPro	IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01181.
Pfam	PF00331. Glyco_hydro_10. 1 hit. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9KQ55_CLOPH

Accession

Primary (citable) accession number: A9KQ55

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)