Reviewed, UniProtKB/Swiss-Prot A9KMA3 (GLGA_CLOPH)

Names and origin

Protein names

Recommended name:
    Glycogen synthase
    EC=2.4.1.21
Alternative name(s):
    Starch [bacterial glycogen] synthase

Gene names

Name:	glgA
Ordered Locus Names:	Cphy_2496

Organism

Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]

Taxonomic identifier

357809 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	478 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity.
Catalytic activity	ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP MF_00484
Pathway	Glycan biosynthesis; glycogen biosynthesis. HAMAP MF_00484
Sequence similarities	Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
Biological process	Glycogen biosynthesis
Molecular function	Glycosyltransferase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glycogen biosynthetic process Inferred from electronic annotation. Source: HAMAP
Molecular function	starch synthase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 478	478	Glycogen synthase HAMAP MF_00484		PRO_1000081322
Sites
	Binding site	16	1	ADP-glucose By similarity

Sequences

	Sequence		Length	Mass (Da)
	A9KMA3-1 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 3F30286673DD1E1A	FASTA	478	55,862
	10 20 30 40 50 60 MKKILFVASE SVPFIKTDGL ADVVGSLPKY INKNNFDIRV ILPNYMSIPR QWKEKMLYRT 70 80 90 100 110 120 HFYMNLNWRT QYVGVLEYQY EGIWYYFIDN EFYFAGNKPY GNIYEDIEKF AFLSKAVLTC 130 140 150 160 170 180 LPVLDFRPDI IHCHDWQTGL VPVFLHDSFQ KNEFYHGIKT IMTIHNLKFQ GVWDKKTVQD 190 200 210 220 230 240 ITALSEYYFS PDKLETYGDA NYLKGGIVFS DYITTVSDTY AHDITMPFYG EGLDGLMRAR 250 260 270 280 290 300 SDCLCGIVNG IDYEEYNPEF DPFINKPYNA KNFRKEKIKN KRALQQELGL AKDDKAFMIG 310 320 330 340 350 360 IVSRLIDQNG LDLIDCVMED ICAEDTQLII LGTGKDRYEN LFRHYARKYS SRVSANIFYS 370 380 390 400 410 420 NEQSHKIYAA CDAFLMPSLF EPCGLSQLMS LRYGTVPIVR ETGGLVDTVE PYNQHESTGT 430 440 450 460 470 GFTFKNYNAH EMLYTIRFAK EIYQDKKREW NKIIDRGMAK DFSWKTSARK YEELYESL

References

[1]

"Complete genome sequence of Clostridium phytofermentans ISDg." Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	CP000885 Genomic DNA. Translation: ABX42857.1.
RefSeq	YP_001559596.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	5742567.
GenomeReviews	Gene locus Cphy_2496 in contig CP000885_GR.
KEGG	cpy:Cphy_2496.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	YQGPWRW.
Family and domain databases
HAMAP	MF_00484. [Tree]
InterPro	IPR011835. GlgA. IPR001296. Glyco_trans_1. IPR013534. Glyco_transf_5. [Graphical view]
Pfam	PF08323. Glyco_transf_5. 1 hit. PF00534. Glycos_transf_1. 1 hit. [Graphical view]
TIGRFAMs	TIGR02095. glgA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

GLGA_CLOPH

Accession

Primary (citable) accession number: A9KMA3

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 20, 2008
Last sequence update:	February 5, 2008
Last modified:	November 3, 2009
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)