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A9KMA3 (GLGA_CLOPH) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Glycogen synthase

EC=2.4.1.21
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene names
Name:glgA
Ordered Locus Names:Cphy_2496
OrganismClostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]
Taxonomic identifier357809 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity. HAMAP-Rule MF_00484

Catalytic activity

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1). HAMAP-Rule MF_00484

Pathway

Glycan biosynthesis; glycogen biosynthesis. HAMAP-Rule MF_00484

Sequence similarities

Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.

Ontologies

Keywords
   Biological processGlycogen biosynthesis
   Molecular functionGlycosyltransferase
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglycogen biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Molecular_functionstarch synthase activity

Inferred from electronic annotation. Source: UniProtKB-HAMAP

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 478478Glycogen synthase HAMAP-Rule MF_00484
PRO_1000081322

Sites

Binding site161ADP-glucose By similarity

Sequences

Sequence LengthMass (Da)Tools
A9KMA3 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 3F30286673DD1E1A

FASTA47855,862
        10         20         30         40         50         60 
MKKILFVASE SVPFIKTDGL ADVVGSLPKY INKNNFDIRV ILPNYMSIPR QWKEKMLYRT 

        70         80         90        100        110        120 
HFYMNLNWRT QYVGVLEYQY EGIWYYFIDN EFYFAGNKPY GNIYEDIEKF AFLSKAVLTC 

       130        140        150        160        170        180 
LPVLDFRPDI IHCHDWQTGL VPVFLHDSFQ KNEFYHGIKT IMTIHNLKFQ GVWDKKTVQD 

       190        200        210        220        230        240 
ITALSEYYFS PDKLETYGDA NYLKGGIVFS DYITTVSDTY AHDITMPFYG EGLDGLMRAR 

       250        260        270        280        290        300 
SDCLCGIVNG IDYEEYNPEF DPFINKPYNA KNFRKEKIKN KRALQQELGL AKDDKAFMIG 

       310        320        330        340        350        360 
IVSRLIDQNG LDLIDCVMED ICAEDTQLII LGTGKDRYEN LFRHYARKYS SRVSANIFYS 

       370        380        390        400        410        420 
NEQSHKIYAA CDAFLMPSLF EPCGLSQLMS LRYGTVPIVR ETGGLVDTVE PYNQHESTGT 

       430        440        450        460        470 
GFTFKNYNAH EMLYTIRFAK EIYQDKKREW NKIIDRGMAK DFSWKTSARK YEELYESL 

« Hide

References

[1]"Complete genome sequence of Clostridium phytofermentans ISDg."
Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. expand/collapse author list , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P.
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700394 / DSM 18823 / ISDg.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000885 Genomic DNA. Translation: ABX42857.1.
RefSeqYP_001559596.1. NC_010001.1.

3D structure databases

ProteinModelPortalA9KMA3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING357809.Cphy_2496.

Protein family/group databases

CAZyGT5. Glycosyltransferase Family 5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABX42857; ABX42857; Cphy_2496.
GeneID5742567.
KEGGcpy:Cphy_2496.
PATRIC19504722. VBICloPhy16213_2599.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0297.
HOGENOMHOG000294940.
KOK00703.
OMASEVEIYF.
OrthoDBEOG6JTC6Z.
ProtClustDBCLSK2506261.

Enzyme and pathway databases

BioCycCPHY357809:GHCL-2536-MONOMER.
UniPathwayUPA00164.

Family and domain databases

HAMAPMF_00484. Glycogen_synth.
InterProIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsTIGR02095. glgA. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGA_CLOPH
AccessionPrimary (citable) accession number: A9KMA3
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 5, 2008
Last modified: February 19, 2014
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways