A9KKX9 (A9KKX9_CLOPH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alpha amylase catalytic region EMBL ABX42711.1

Gene names

Ordered Locus Names:

Cphy_2350

Organism

Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) [Complete proteome] [HAMAP]

Taxonomic identifier

357809 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	583 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9KKX9 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: B9699F02EF1D1421	FASTA	583	69,006
	10 20 30 40 50 60 MKFEAIYHRT SDNYCYPLNE EDLIINIKTG HDIERVFIYY GDPFEGGILG GNWTWNGVEE 70 80 90 100 110 120 ELIYKKNLTH HIWWTTTVKP KFKRCKYYFK LVANDTSYYY FEDGFYTEAE MNHQDKNLVY 130 140 150 160 170 180 FTFPWMNSID INKTPDWVND TVWYQIFPER FNNGDKENDP KNVKAWGFHT VSNDEFYGGD 190 200 210 220 230 240 LQGIINRLDY LADIGISGIY LTPIFEANTS HKYDTKDYMK IDPHFGDEKV FKNLVDTAHE 250 260 270 280 290 300 KGIRIMLDGV FNHCGNQFAP WLDVLKNGPD SKYFNWFMIN KWPFNKEDHN TNDGSFYSFA 310 320 330 340 350 360 FTSRMPKLNT NNPEVIKYLL DVVEYWVKNF DIDGIRLDVA NEISHRFCKD LRKLTKELKP 370 380 390 400 410 420 DFYILGELWH DAITWLHGDE FDGVMNYPLA TSLADYWVYP EKTNYDFECA INHNFTMYMQ 430 440 450 460 470 480 QTNDVLFNLL DSHDTNRLID KVKDIDIFYQ QLAVLFTMPG SPCIYYGTEI AMEGSYDPDC 490 500 510 520 530 540 RRCMPWEDID AGLFKDRIEI IKALIHLRKT NNAFKSRHYH FIEDKNNNRV IHYIKTDEDH 550 560 570 580 KQVEVILNCS KDSIVVQRKG NELFSLLNED TILKPKGVFI QQI

References

[1]

"Complete genome sequence of Clostridium phytofermentans ISDg." Leschine S.B., Warnick T.A., Blanchard J.L., Schnell D.J., Petit E.L., LaTouf W.G., Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Kiss H., Brettin T., Bruce D., Detter J.C. , Han C., Kuske C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.A., Richardson P. Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000885 Genomic DNA. Translation: ABX42711.1.
RefSeq	YP_001559450.1. NC_010001.1.
3D structure databases
ProteinModelPortal	A9KKX9.
ModBase	Search...
Protein-protein interaction databases
STRING	A9KKX9.
Protein family/group databases
CAZy	GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5745409.
GenomeReviews	Gene locus Cphy_2350 in contig CP000885_GR.
KEGG	cpy:Cphy_2350.
PATRIC	19504430. VBICloPhy16213_2453.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	ETVWYQI.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9KKX9_CLOPH

Accession

Primary (citable) accession number: A9KKX9

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)