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Protein
Submitted name:

Mannan endo-1,4-beta-mannosidase

Gene

Cphy_2276

Organism
Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) (Lachnoclostridium phytofermentans)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciCPHY357809:GHCL-2316-MONOMER.

Protein family/group databases

CAZyiCBM35. Carbohydrate-Binding Module Family 35.
GH26. Glycoside Hydrolase Family 26.

Names & Taxonomyi

Protein namesi
Submitted name:
Mannan endo-1,4-beta-mannosidaseImported (EC:3.2.1.78Imported)
Gene namesi
Ordered Locus Names:Cphy_2276Imported
OrganismiClostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) (Lachnoclostridium phytofermentans)Imported
Taxonomic identifieri357809 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesLachnospiraceae
Proteomesi
  • UP000000370 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2828Sequence analysisAdd
BLAST
Chaini29 – 532504Sequence analysisPRO_5002740174Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi357809.Cphy_2276.

Structurei

3D structure databases

ProteinModelPortaliA9KK65.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini73 – 191119CBM6 (carbohydrate binding type-6)InterPro annotationAdd
BLAST
Domaini214 – 520307GH26 (glycosyl hydrolase family 26)InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105D3P. Bacteria.
COG4124. LUCA.
HOGENOMiHOG000235025.
KOiK01218.
OMAiYQLILRD.
OrthoDBiEOG66HVDV.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR022790. GH26_dom.
IPR000805. Glyco_hydro_26.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR40079. PTHR40079. 1 hit.
PfamiPF16990. CBM_35. 1 hit.
PF02156. Glyco_hydro_26. 1 hit.
[Graphical view]
PRINTSiPR00739. GLHYDRLASE26.
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
PS51764. GH26. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A9KK65-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRKQGFYLMC LLLGLSVNGC TSPGTSGESS NPKDVVVDTE VVNTETVNTD
60 70 80 90 100
AACTDTPSTV LPFTTLSPTM IPIELEAEDA VLSGNVKIES SKSGFSGTGY
110 120 130 140 150
ISGFEDDSDY CEFKLTIEED GFYDLNFISA ALGGYKENYV LVDDENVGVA
160 170 180 190 200
VTDQSKFSDS KLERIFLTNG THNIKLSKFW GWVVVDKLIV TSSIELDTSI
210 220 230 240 250
YEVPATLVNQ NASDRTKRLM SYLTDIYGKK FLSGQYCEKG MYGTEISAIW
260 270 280 290 300
KTTEGKFPAV LGLDLIDYTS SRVEKGSSSK AIQYAMEFDE KGGIVTFCWH
310 320 330 340 350
WNAPTKYLTG TWYRGFYTEE TNIDLVKIMN GQDDEGYQLL MNDIDAIAKE
360 370 380 390 400
LLKLKEADVP ILWRPLHEAS GGWFWWGAKG AEAYKKLYIL LYEKLTNEYG
410 420 430 440 450
LNNLIWLWNG QDKEWYPGDE YVDIIGEDIY PGEKVYTSQI NKYLKAMNYT
460 470 480 490 500
QAKKMVVLSE NGCLFDPDLA IRDGAMWGFF ATWGGEFVTK SALINWLSEQ
510 520 530
YTEEYMVKKV YAHDSVITLD KLPDLKNYPI YE
Length:532
Mass (Da):60,010
Last modified:February 5, 2008 - v1
Checksum:iDEEBADEC9EDA26B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000885 Genomic DNA. Translation: ABX42637.1.
RefSeqiWP_012200291.1. NC_010001.1.

Genome annotation databases

EnsemblBacteriaiABX42637; ABX42637; Cphy_2276.
KEGGicpy:Cphy_2276.
PATRICi19504272. VBICloPhy16213_2374.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000885 Genomic DNA. Translation: ABX42637.1.
RefSeqiWP_012200291.1. NC_010001.1.

3D structure databases

ProteinModelPortaliA9KK65.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi357809.Cphy_2276.

Protein family/group databases

CAZyiCBM35. Carbohydrate-Binding Module Family 35.
GH26. Glycoside Hydrolase Family 26.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABX42637; ABX42637; Cphy_2276.
KEGGicpy:Cphy_2276.
PATRICi19504272. VBICloPhy16213_2374.

Phylogenomic databases

eggNOGiENOG4105D3P. Bacteria.
COG4124. LUCA.
HOGENOMiHOG000235025.
KOiK01218.
OMAiYQLILRD.
OrthoDBiEOG66HVDV.

Enzyme and pathway databases

BioCyciCPHY357809:GHCL-2316-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR022790. GH26_dom.
IPR000805. Glyco_hydro_26.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR40079. PTHR40079. 1 hit.
PfamiPF16990. CBM_35. 1 hit.
PF02156. Glyco_hydro_26. 1 hit.
[Graphical view]
PRINTSiPR00739. GLHYDRLASE26.
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
PS51764. GH26. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700394 / DSM 18823 / ISDgImported.

Entry informationi

Entry nameiA9KK65_CLOPH
AccessioniPrimary (citable) accession number: A9KK65
Entry historyi
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: April 13, 2016
This is version 56 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.