A9KG22 (A9KG22_COXBN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Pseudouridine synthase RuleBase RU003887
EC=5.4.99.- RuleBase RU003887

Gene names

Ordered Locus Names:

CBUD_0984 EMBL ABS78454.1

Organism

Coxiella burnetii (strain Dugway 5J108-111) [Complete proteome] [HAMAP] EMBL ABS78454.1

Taxonomic identifier

434922 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella › Coxiella burnetii

Protein attributes

Sequence length	244 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rsuA family. RuleBase RU003887 Contains 1 S4 RNA-binding domain. SAAS SAAS006145

Ontologies

Keywords
Ligand	RNA-binding SAAS SAAS006145
Molecular function	Isomerase SAAS SAAS006145 RuleBase RU003887 Lyase EMBL ABS78454.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pseudouridine synthesis Inferred from electronic annotation. Source: InterPro
Molecular_function	RNA binding Inferred from electronic annotation. Source: UniProtKB-KW lyase activity Inferred from electronic annotation. Source: UniProtKB-KW pseudouridine synthase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9KG22 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 448F618392656A70	FASTA	244	27,770
	10 20 30 40 50 60 MKERIQKVLA RSGYGSRREI EKMIAEGRIK VNQRLAQLGD RITEQDLVYI DGQLSSLSAP 70 80 90 100 110 120 EQVRVLLYHK PEGEICTRKD PEGRTTVFET LPRLKDGRWV IIGRLDINTS GLLLFTNEGE 130 140 150 160 170 180 LANRLMHPSA QVEREYAVRV LGAVDADMTQ KLAHGVGLED GKARFEDIVD VGGDGKNRWF 190 200 210 220 230 240 HVVVVEGRHR FVRRLWESQG VKVSRLIRVR FGPIVLSKSL RRGAWKELES PEIKSLQNIS IVPR

References

[1]

"Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella." Beare P.A., Unsworth N., Andoh M., Voth D.E., Omsland A., Gilk S.D., Williams K.P., Sobral B.W., Kupko J.J.III., Porcella S.F., Samuel J.E., Heinzen R.A. Infect. Immun. 77:642-656(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Dugway 5J108-111 EMBL ABS78454.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000733 Genomic DNA. Translation: ABS78454.1.
RefSeq	YP_001424364.1. NC_009727.1.
3D structure databases
ProteinModelPortal	A9KG22.
ModBase	Search...
Protein-protein interaction databases
STRING	434922.CBUD_0984.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABS78454; ABS78454; CBUD_0984.
GeneID	5457513.
KEGG	cbd:CBUD_0984.
PATRIC	17921798. VBICoxBur32972_1005.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1187.
HOGENOM	HOG000044954.
KO	K06178.
OMA	PRGGWIE.
ProtClustDB	CLSK940429.
Enzyme and pathway databases
BioCyc	CBUR434922:GJTP-1040-MONOMER.
Family and domain databases
Gene3D	3.10.290.10. 1 hit.
InterPro	IPR020103. PsdUridine_synth_cat_dom. IPR000748. PsdUridine_synth_RsuA/RluB/E/F. IPR018496. PsdUridine_synth_RsuA/RluB_CS. IPR006145. PsdUridine_synth_RsuA/RluD. IPR002942. S4_RNA-bd. [Graphical view]
Pfam	PF00849. PseudoU_synth_2. 1 hit. PF01479. S4. 1 hit. [Graphical view]
SMART	SM00363. S4. 1 hit. [Graphical view]
SUPFAM	SSF55120. PsdUridine_synth_cat_dom. 1 hit.
TIGRFAMs	TIGR00093. TIGR00093. 1 hit.
PROSITE	PS01149. PSI_RSU. 1 hit. PS50889. S4. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A9KG22_COXBN

Accession

Primary (citable) accession number: A9KG22

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	May 1, 2013
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)