A9KBC6 (A9KBC6_COXBN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL ABS78405.1
EC=4.1.2.4 EMBL ABS78405.1

Gene names

Name:	deoC EMBL ABS78405.1
Ordered Locus Names:	CBUD_0140

Organism

Coxiella burnetii (strain Dugway 5J108-111) [Complete proteome] [HAMAP] EMBL ABS78405.1

Taxonomic identifier

434922 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Legionellales › Coxiellaceae › Coxiella

Protein attributes

Sequence length	241 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343

Ontologies

Keywords
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343 EMBL ABS78405.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A9KBC6 [UniParc]. Last modified February 5, 2008. Version 1. Checksum: 41CE4455A13D7373	FASTA	241	26,259
	10 20 30 40 50 60 MNSDFAKTLI PLIDLTRLNE DDTPETIEQL CHQAKTPYGP VAAVCIYPQF VKQARFLLAG 70 80 90 100 110 120 VPIKVATVAN FPKGDQSRVD CIQSIKQSLD EGADEIDVVM PYKSYLEGNT KEVRAFLEAC 130 140 150 160 170 180 RGTCGPQAIL KVILETGALI KRDIIFDATK LAIHAGADFI KTSTGKLPSG ATIEAAEIIL 190 200 210 220 230 240 EAIQNHANKR VGLKISGGIQ TFEQAVPYIQ LIKDKMGAAW ITPQTIRFGA SRLLADIMQC L

References

[1]

"Comparative genomics reveal extensive transposon-mediated genomic plasticity and diversity among potential effector proteins within the genus Coxiella." Beare P.A., Unsworth N., Andoh M., Voth D.E., Omsland A., Gilk S.D., Williams K.P., Sobral B.W., Kupko J.J. III, Porcella S.F., Samuel J.E., Heinzen R.A. Infect. Immun. 77:642-656(2009) [PubMed: 19047403] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000733 Genomic DNA. Translation: ABS78405.1.
RefSeq	YP_001423571.1. NC_009727.1.
3D structure databases
ProteinModelPortal	A9KBC6.
ModBase	Search...
Protein-protein interaction databases
STRING	A9KBC6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5458578.
GenomeReviews	Gene locus CBUD_0140 in contig CP000733_GR.
KEGG	cbd:CBUD_0140.
PATRIC	17920124. VBICoxBur32972_0186.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG636421.
OMA	ELVQQCK.
ProtClustDB	CLSK913774.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/AroFGH_arch. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K01619.
PANTHER	PTHR10889. DeoC. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. DeoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A9KBC6_COXBN

Accession

Primary (citable) accession number: A9KBC6

Entry history

Integrated into UniProtKB/TrEMBL:	February 5, 2008
Last sequence update:	February 5, 2008
Last modified:	December 14, 2011
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)