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Protein
Submitted name:

MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)

Gene

mef2c

Organism
Xenopus tropicalis (Western clawed frog) (Silurana tropicalis)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-XTR-375170 CDO in myogenesis

Names & Taxonomyi

Protein namesi
Submitted name:
MADS box transcription enhancer factor 2, polypeptide C (myocyte enhancer factor 2C)Imported
Submitted name:
Mef2c proteinImported
Gene namesi
Name:mef2cImported
OrganismiXenopus tropicalis (Western clawed frog) (Silurana tropicalis)Imported
Taxonomic identifieri8364 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusSilurana
Proteomesi
  • UP000008143 Componenti: Unassembled WGS sequence

Organism-specific databases

XenbaseiXB-GENE-486958 mef2c

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Expressioni

Gene expression databases

BgeeiENSXETG00000007038
ExpressionAtlasiA9JTN7 baseline

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 61MADS-boxInterPro annotationAdd BLAST61

Phylogenomic databases

GeneTreeiENSGT00390000011828
HOGENOMiHOG000230620
HOVERGENiHBG053944
KOiK04454

Family and domain databases

CDDicd00265 MADS_MEF2_like, 1 hit
Gene3Di3.40.1810.10, 1 hit
InterProiView protein in InterPro
IPR022102 HJURP_C
IPR033896 MADS_MEF2-like
IPR002100 TF_MADSbox
IPR036879 TF_MADSbox_sf
PfamiView protein in Pfam
PF12347 HJURP_C, 1 hit
PF00319 SRF-TF, 1 hit
PRINTSiPR00404 MADSDOMAIN
SMARTiView protein in SMART
SM00432 MADS, 1 hit
SUPFAMiSSF55455 SSF55455, 1 hit
PROSITEiView protein in PROSITE
PS00350 MADS_BOX_1, 1 hit
PS50066 MADS_BOX_2, 1 hit

Sequencei

Sequence statusi: Complete.

A9JTN7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGRKKIQITR IMDERNRQVT FTKRKFGLMK KAYELSVLCD CEIALIIFNS
60 70 80 90 100
TNKLFQYAST DMDKVLLKYT EYNEPHESRT NSDIVETLRK KGLNGCDSPD
110 120 130 140 150
PDADDSVGHS PESEDKYRKI NEDIDLMISR QRLCAVPPPN FEMPVSIPVS
160 170 180 190 200
NPNSLAYSNP AVSLGNHNLL PLSHPSLHRN SMSPGVTHRP PSAGNTGGLM
210 220 230 240 250
GGDLTTGAGT SAGNGYGNHR NSPGLLVSPG NLNKNMQTKS PPPMNLGMNN
260 270 280 290 300
RKPDLRVLIP PGSKNTMPSV NQRINNSQSA QSLATPVVPV ATPTLPGQGM
310 320 330 340 350
GGYPTAISTT YGTEYSLSSA DLSSLSGFNT SALHLGSVTG WQQHHLHNMP
360 370 380 390 400
HSALSQLGDR TTTPSGYPQH TRHEAGRSPV DSLSSCSSSY DGSDREDHRN
410 420 430
DFHSPIGLTR PSPDERESPS VKRMRLSEGW AT
Length:432
Mass (Da):46,967
Last modified:February 5, 2008 - v1
Checksum:iEFEF67C8B6488510
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAMC01028232 Genomic DNA No translation available.
AAMC01028233 Genomic DNA No translation available.
AAMC01028234 Genomic DNA No translation available.
AAMC01028235 Genomic DNA No translation available.
AAMC01028236 Genomic DNA No translation available.
BC155416 mRNA Translation: AAI55417.1
RefSeqiNP_001106387.1, NM_001112916.1
UniGeneiStr.25453

Genome annotation databases

EnsembliENSXETT00000060512; ENSXETP00000059290; ENSXETG00000007038
GeneIDi100127198
KEGGixtr:100127198

Similar proteinsi

Entry informationi

Entry nameiA9JTN7_XENTR
AccessioniPrimary (citable) accession number: A9JTN7
Entry historyiIntegrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 23, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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