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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Bartonella tribocorum (strain CIP 105476 / IBS 506)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotation
Gene namesi
Name:rplMUniRule annotation
Ordered Locus Names:BT_1475
OrganismiBartonella tribocorum (strain CIP 105476 / IBS 506)
Taxonomic identifieri382640 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBartonellaceaeBartonella
Proteomesi
  • UP000001592 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10000870761 – 15450S ribosomal protein L13Add BLAST154

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Protein-protein interaction databases

STRINGi382640.Btr_1475.

Structurei

3D structure databases

ProteinModelPortaliA9IVX4.
SMRiA9IVX4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4108UM5. Bacteria.
COG0102. LUCA.
KOiK02871.
OMAiVLMGKHK.

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR036899. Ribosomal_L13_sf.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

A9IVX4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATFSQKPTE VVKKWVIIDA ENLVLGRLAA FVANRLRGKH KATFTPHVDD
60 70 80 90 100
GDNVIVINAD KIALTGKKYT DKKYYWHTGY IGGIKERTAR QLLEGRFPER
110 120 130 140 150
VVEKAVERMI PRGPLGRRQL KNLRVYAGSQ HPHEAQQPES LDVGALNRKN

KRIA
Length:154
Mass (Da):17,482
Last modified:February 5, 2008 - v1
Checksum:i071E3981314C3FDA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM260525 Genomic DNA. Translation: CAK01824.1.
RefSeqiWP_012231964.1. NC_010161.1.

Genome annotation databases

KEGGibtr:BT_1475.

Similar proteinsi

Entry informationi

Entry nameiRL13_BART1
AccessioniPrimary (citable) accession number: A9IVX4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: February 5, 2008
Last modified: October 25, 2017
This is version 66 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families