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A9ITT4 (A9ITT4_BORPD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.3.1.17 EMBL CAP43462.1
Gene names
Name:sdaA EMBL CAP43462.1
Ordered Locus Names:Bpet3120
OrganismBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]
Taxonomic identifier340100 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesAlcaligenaceaeBordetella

Protein attributes

Sequence length463 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL CAP43462.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processgluconeogenesis

Inferred from electronic annotation. Source: InterPro

   Molecular function4 iron, 4 sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

L-serine ammonia-lyase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A9ITT4 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: 77B233E58F09A48F

FASTA46348,982
        10         20         30         40         50         60 
MAVSAFDLFK IGIGPSSSHT VGPMRAALLF AQGLERDGLL PRVAGLRVEL YGSLGATGKG 

        70         80         90        100        110        120 
HGTDKGVLLG LMGQAPDTVD PAAIPGLLQA VRTNKSLPVL GHFAVPFVEK EHILFYRREA 

       130        140        150        160        170        180 
LAEHPNGMKF HAFDAAGASL RESRYLSVGG GFVVTAGAAN TQIIAAHDQL PFAFRTAREL 

       190        200        210        220        230        240 
VDMCRAGGYT VAQVMMQNEL TWRSQSEVET TLDRIWQVMQ DCVSRGCGIG HPEADGDLPG 

       250        260        270        280        290        300 
PLKVRRRAPE LYRSLTLRAE RTLSDPLSVM DWVNLYAMAV NEENAAGGRV VTAPTNGAAG 

       310        320        330        340        350        360 
IIPAVLHYYD RFVPGAGPQG VRDFLLTAAA IGLLYKYNAS LSGAEVGCQG EVGVACSMAA 

       370        380        390        400        410        420 
GALAAVLGGS VEQVENAAEI GMEHNLGLTC DPVGGLVQIP CIERNAMASV KAVNAARMAL 

       430        440        450        460 
RGDGHHYVSL DSVIKTMRET GADMKTKYKE TARGGLAVNI VEC 

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References

[1]"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae."
Gross R., Guzman C.A., Sebaihia M., Martin dos Santos V.A.P., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. expand/collapse author list , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Voerholter F.-J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R.
BMC Genomics 9:449-449(2008) [PubMed: 18826580] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM902716 Genomic DNA. Translation: CAP43462.1.
RefSeqYP_001631730.1. NC_010170.1.

3D structure databases

ProteinModelPortalA9ITT4.
ModBaseSearch...

Protein-protein interaction databases

STRINGA9ITT4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5817869.
GenomeReviewsGene locus Bpet3120 in contig AM902716_GR.
KEGGbpt:Bpet3120.
PATRIC21167793. VBIBorPet31633_3145.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG304565.
OMALLYKYNA.
ProtClustDBCLSK897624.

Family and domain databases

InterProIPR004644. Fe-S_L-Ser_mono.
IPR005130. Ser_deHydtase-like_asu.
IPR005131. Ser_deHydtase_bsu.
[Graphical view]
KOK01752.
PfamPF03313. SDH_alpha. 1 hit.
PF03315. SDH_beta. 1 hit.
[Graphical view]
TIGRFAMsTIGR00720. Sda_mono. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA9ITT4_BORPD
AccessionPrimary (citable) accession number: A9ITT4
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)