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A9IRS7 (A9IRS7_BORPD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Argininosuccinate lyase HAMAP-Rule MF_00006
Short name=ASAL HAMAP-Rule MF_00006
EC=4.3.2.1 HAMAP-Rule MF_00006
Alternative name(s):
Arginosuccinase HAMAP-Rule MF_00006
Gene names
Name:argH HAMAP-Rule MF_00006
Ordered Locus Names:Bpet2870
OrganismBordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) [Complete proteome] [HAMAP]
Taxonomic identifier340100 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Bordetella ›

Protein attributes

Sequence length471 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

2-(N(omega)-L-arginino)succinate = fumarate + L-arginine. HAMAP-Rule MF_00006 SAAS SAAS009049

Pathway

Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 3/3. HAMAP-Rule MF_00006 SAAS SAAS009049

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00006 SAAS SAAS009049.

Sequence similarities

Belongs to the lyase 1 family. Argininosuccinate lyase subfamily. HAMAP-Rule MF_00006

Sequences

Sequence LengthMass (Da)Tools
A9IRS7 [UniParc].

Last modified February 5, 2008. Version 1.
Checksum: D0B3CDAA17FE4A8C

FASTA47151,737
        10         20         30         40         50         60 
MAKTPSSDQN QFANKAQAWS ARFSEPVSEL VKRYTASVDF DQRLARHDIQ GSLAHAEMLA 

        70         80         90        100        110        120 
AQGIIPAQDL ADIQRGMAQI LAEIDAGTFQ WLLDLEDVHL NIEKRLVELV GDAGKRLHTG 

       130        140        150        160        170        180 
RSRNDQVATD IRLWLRAEID TLVDLLRQLR RALATVALEN AATIMPGFTH LQVAQPVTFG 

       190        200        210        220        230        240 
HHLLAYAEMF GRDAERLADC RKRINRLPLG AAALAGTTFP IDRERVAKTL GFDGVCRNSL 

       250        260        270        280        290        300 
DAVSDRDFAI EFCAAAALIM THVSRLSEEL VLWISPRVGF IDLADRFCTG SSIMPQKKNP 

       310        320        330        340        350        360 
DVPELARGKT GRVNGHLMAL LTLMKGQPLA YNKDNQEDKE GLFDTVDTLR DTLTIFADMA 

       370        380        390        400        410        420 
GGIKVKADNM RAAALQGFAT ATDLADYLVK QGVPFRDAHE VVAHAVRDCE QRGCDLADLP 

       430        440        450        460        470 
LADLKAYHPT IGDDVHAVLT LEGSVAARKH IGGTAPERVR EEAQRVLQET A

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References

[1]"The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae."
Gross R., Guzman C.A., Sebaihia M., Martins Dos Santos V.A., Pieper D.H., Koebnik R., Lechner M., Bartels D., Buhrmester J., Choudhuri J.V., Ebensen T., Gaigalat L., Herrmann S., Khachane A.N., Larisch C., Link S., Linke B., Meyer F. expand/collapse author list , Mormann S., Nakunst D., Rueckert C., Schneiker-Bekel S., Schulze K., Vorhoelter F.J., Yevsa T., Engle J.T., Goldman W.E., Puehler A., Goebel U.B., Goesmann A., Bloecker H., Kaiser O., Martinez-Arias R.
BMC Genomics 9:449-449(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-461 / DSM 12804 / CCUG 43448.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AM902716 Genomic DNA. Translation: CAP43212.1.
RefSeqYP_001631480.1. NC_010170.1.

3D structure databases

ProteinModelPortalA9IRS7.
SMRA9IRS7. Positions 28-468.
ModBaseSearch...

Protein-protein interaction databases

STRING340100.Bpet2870.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAP43212; CAP43212; Bpet2870.
GeneID5818317.
KEGGbpt:Bpet2870.
PATRIC21167262. VBIBorPet31633_2886.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0165.
HOGENOMHOG000242744.
KOK01755.
OMAKEGIFDA.
ProtClustDBPRK00855.

Enzyme and pathway databases

BioCycBPET340100:GJBO-2904-MONOMER.
UniPathwayUPA00068; UER00114.

Family and domain databases

Gene3D1.10.275.10. 1 hit.
HAMAPMF_00006. Arg_succ_lyase.
InterProIPR009049. Argininosuccinate_lyase.
IPR003031. D_crystallin.
IPR024083. Fumarase/histidase_N.
IPR000362. Fumarate_lyase.
IPR020557. Fumarate_lyase_CS.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERPTHR11444:SF3. PTHR11444:SF3. 1 hit.
PfamPF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSPR00145. ARGSUCLYASE.
PR00149. FUMRATELYASE.
SUPFAMSSF48557. L-Aspartase-like. 1 hit.
TIGRFAMsTIGR00838. argH. 1 hit.
PROSITEPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA9IRS7_BORPD
AccessionPrimary (citable) accession number: A9IRS7
Entry history
Integrated into UniProtKB/TrEMBL: February 5, 2008
Last sequence update: February 5, 2008
Last modified: May 1, 2013
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info